Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139388549
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Entry
139388549 CDS
T10872
Name
(RefSeq) amyloid-beta A4 precursor protein-binding family A member 1-like
KO
K04531
amyloid beta A4 precursor protein-binding family A member 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139388549
Membrane trafficking [BR:
ocla04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
139388549
Endocytosis
Clathrin-mediated endocytosis
LDLR adaptor proteins
139388549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PID
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
139388549
NCBI-ProteinID:
XP_070991374
LinkDB
All DBs
Position
29:complement(19155832..19167200)
Genome browser
AA seq
1090 aa
AA seq
DB search
MSYKQQGEGLGDAILEEHKASPASRNRQPNSTGGEGVPVRRSWRPCQMLGQDGKEHHHHH
HPPIPHQGSGRGPARHRRRTPSGQGPSRQWEGAEMEPPHHTQPPRPGAARYRRQGEPRVR
VHRQRPPTRDGQDTHALPFQQQRSSGAPLTEQRDMTGPATMKQQHPPHSCPPHHTQNSRA
PDLTAGTSPIPTHHTPCPTAPDPPSQDLHQTLPNIESPQPQEEEEEGYSSSITQSVSTQS
GFDNQTDLENQREGGHGEGELKETGLGEEDSSERDLVEDDQEDRTNEYCSDTESAASLSM
EAPPLSSPPHQSPFLPPPLQSENSDQYSDEFSPSPTYENDIMPDDENYTDSPLSHPKSFT
FRDSYPKTYAEFYNESYPQSESITESNTEPYAKSYPQSFPAPLKLINYPDRRSEADPDEP
YSELHPGSCSRRQSEHVYKGATDTEPQPCDSWPGRDVGLPQTSPHWQGRSVGSRLHHYND
TTSDGEDDSLKESPRSQSLGPPPWNVQGEAQSERPSSGQPDSGEFQDEQAGLELRPPAEG
LSEDSVTGSGDAISLAIRDIREAIEEVKTKTVRSPYTPDQPIEPVWVMRPEVSPNEDESS
PEQPPGGEPVSQSPSHYNPVPARVPSPVHVPVPAPAPSRVPVPVPEHVCPVRVESSRTHQ
DQQKEHREQREPPRPPSIEEIQRHMPSFPTYVEVPGPCDPEDLIDGIIFAASYLGSTHLL
SERTPTKSARMQQAQEAMSRVRTAQKQAKNRKKTGGEIPSSTEVDLFMSTQRIKVLNADT
QASMMDLPLRTISYIADIGNMVVLMARGKMVRSRSAQEHLNHTTDHTNSPARDDLPQYRM
VCHVFESEDAQLIAQSIGQAFSVAYQEFLRANGIDPNDLSQREYSDLLNTQDMYNDDLIH
FSKSENCRDVYIEKQKGEMLGVVIVESGWGSILPTVIIASMMHFGPAEKSGGLNIGDQLM
TVNGTSLVGLPLSTCQSIIKGLKAQSKIKLNIVRCPPVTMVLIRRPDLRYQLGFSVQNGI
ICSLMRGGIAERGGVRVGHRIIDINGQSVVATPHEKIVQVLSNAVGEIHMKTMPAAMYRL
LTAQEQPVYI
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgagctacaagcagcagggggaggggctaggtgatgctatcttggaggagcataaggct
tcacctgcttccagaaaccggcagcccaatagcacagggggagaaggggtccctgtccgg
agaagttggagaccctgccaaatgctcggtcaggatgggaaggaacatcaccaccaccat
catcctcctattccgcaccaaggctcgggccgcggccctgcacggcaccgtagacgaact
ccctcagggcagggcccatccagacagtgggagggagcagaaatggagcctcctcaccac
acccagccgcctcgccctggcgcggcccgctaccgccgccagggagagcccagggttaga
gttcacagacagagaccgccgacgagagatggccaagacacccacgccctgccgtttcaa
cagcaacggtcatctggcgctcccctgactgaacagagggacatgactggtcccgcaaca
atgaagcagcagcaccccccacactcctgtccaccccaccacacacagaacagtagagca
cctgaccttactgctggtacctctcctatccccacacaccacacaccatgtcctactgcc
cctgatcccccttcccaagacctgcatcaaacccttcccaacatagagtctccccaacct
caggaggaagaggaggaagggtacagctcatccataacgcagtctgttagtactcaaagt
ggatttgacaaccagacagacctagagaaccagagggaggggggccatggagagggggag
ctaaaagagaccggtctgggagaagaagacagcagcgagagggatctggtagaggatgat
caggaagatagaactaatgagtactgttctgacactgagagtgctgcctcgctaagcatg
gaggctccgcccctgagttcacctcctcaccaatcaccattcttgccccctccacttcag
tctgagaactcggaccaatatagtgacgagtttagcccaagtcccacctatgaaaatgac
ataatgcctgatgatgagaactacactgattctccactgtcccaccccaaatccttcacc
ttcagagactcgtatcctaagacctatgcagaattctataatgagtcctacccacagtca
gaatctatcacagaatccaacacagagccctacgcaaaatcctaccctcagtctttccct
gcacccttgaaattgattaattatccagacaggagatctgaggctgaccctgatgagcca
tattcagaacttcacccaggttcctgcagtcgtagacagagcgagcatgtttataaggga
gctacagacactgaaccccaaccctgtgactcctggccaggtagggatgtggggttacca
cagaccagcccccattggcagggacgctcagtcggctcaaggctacaccactacaatgac
actacgtctgatggggaggacgacagcctcaaagaaagccccagatcccaaagcctgggg
ccacctccctggaacgtgcaaggtgaagcccagtcagagcgtcccagctctgggcagcct
gattcaggtgagttccaggatgagcaggccgggttggagctccgacctccagcggaaggc
ctttcagaggacagtgtcacaggctcaggagatgctatctctctggccatcagggacatc
cgagaggccatagaggaggtgaagacaaagacggtgcgctcgccctacactcctgaccag
cccatagagcctgtgtgggtgatgagaccggaggtcagtcctaatgaggacgaatcctcc
ccagagcagccaccgggtggcgaacctgtctctcagtctccttcacactataacccagtc
ccagcccgagttccctcccctgtccatgttccagtaccagctccagccccatccagagtt
ccggtgccagtcccagagcatgtctgtcctgtgagggtagagtcctccagaacacaccag
gatcagcagaaggagcatagagaacagagggagccgcctaggccaccatccattgaggag
atccagaggcatatgccgtccttccctacatacgtggaagtcccagggccatgtgaccca
gaggacctgattgatggcatcatttttgcagccagctacctgggctccacccacctgctg
tcagagaggactcccactaagagtgcccgcatgcagcaggcccaggaggctatgagccgt
gtcaggactgcacaaaagcaagctaaaaacagaaagaagactgggggggagattccttct
tccactgaagtggatctcttcatgtctacacagaggatcaaagtgctgaatgcagacact
caggcgtccatgatggacctgccactgaggaccatctcctacatcgccgacataggcaac
atggtggtgctgatggccagggggaagatggtacgctccaggagcgctcaggaacatctg
aaccatacaactgaccacaccaacagccctgcccgcgacgacctcccccagtacaggatg
gtctgccacgtgtttgagtcggaggatgcccagctcatagcccagtctattggccaggcc
ttcagtgtggcgtaccaggagttcctgcgggccaatggcatcgacccaaatgacctgagt
cagagggagtacagcgacctgctcaacactcaggacatgtacaacgatgacctcatccac
ttctccaagtcagagaactgcagagatgtttacatagagaagcagaagggagagatgctg
ggcgtggtcatagtggagtcaggctggggctctattctgcccaccgtcatcattgctagc
atgatgcattttgggcctgcggagaagtctggtggactcaacattggtgaccagctcatg
accgtcaatggaaccagtctggttggactgcccctctccacttgccagagtatcatcaag
ggtctgaaggcccagtccaagattaagttgaacatcgtcaggtgtccccccgtcactatg
gtgctgatccgcagaccagacctccgatatcagctgggcttcagcgtacagaatggcatt
atctgcagtctgatgagggggggcattgctgagagaggaggggtccgtgtcggtcatcgc
atcattgatatcaacggtcagagtgtggtggctacacctcatgagaagattgttcaagtc
ctgtctaatgcagtgggagagatccacatgaagacgatgcctgcagccatgtaccgtcta
ttgactgcccaggaacagccggtctacatctga
DBGET
integrated database retrieval system
