Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139388576
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Entry
139388576 CDS
T10872
Name
(RefSeq) vesicle-associated membrane protein 2-like
KO
K13504
vesicle-associated membrane protein 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
139388576
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139388576
Membrane trafficking [BR:
ocla04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
VAMP
139388576
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
139388576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Synaptobrevin
Orf78
MCU
MgtE
Ferlin_C
Syndecan
PRIMA1
Motif
Other DBs
NCBI-GeneID:
139388576
NCBI-ProteinID:
XP_070991421
LinkDB
All DBs
Position
29:complement(28019386..28027447)
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AA seq
110 aa
AA seq
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MSAPAAAGAPADGAAPPPNLTSNRRLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDR
ADALQAGASQFETSAAKLKNKYWWKNAKMMIILGLICAIVLIVLIVYFST
NT seq
333 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccccagctgctgccggcgcccccgcagatggagcggcgccccctcccaacctc
accagcaaccgccgcctgcaacagacacaggctcaggtggatgaggtggtggatatcatg
cgtgtaaacgtggataaggttctggagcgtgatcagaagctgtcagagctggatgatcgg
gccgatgctctgcaggctggagcctcacagttcgagaccagcgctgcaaaactcaagaac
aagtattggtggaagaatgccaagatgatgattatcctggggctgatatgtgcgattgtc
ctcattgtcctcatcgtctacttcagcacctaa
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