Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139388610
Help
Entry
139388610 CDS
T10872
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1-like
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139388610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139388610
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
139388610
Endosome - Golgi transport
Arf GTPase associated proteins
139388610
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
139388610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArfGap
RhoGAP
PH
PH_6
Extensin_1
DUF7573
Zf_1st_IFT121
Motif
Other DBs
NCBI-GeneID:
139388610
NCBI-ProteinID:
XP_070991471
LinkDB
All DBs
Position
29:35298873..35320045
Genome browser
AA seq
1135 aa
AA seq
DB search
MSAPFGPDMPVPVPKPRTRYKRAGGSPQIQLSSDRDLIHDTPDTGIHSRGIPPANDLLAE
KEDNPAIILNKPAITSPAEQNPSQCNFLLFRSDSGVTPSYPVLDSNGLCPSVWLSFSPHS
PAADTDPYVSPAADTDPYVSPAADTDPYVSPAANTDPYVSPAANTDPYVSPAADTDPYVS
PAADTDPYVSPAADTDPYVSPAADTDPYVSPAADTDPYVSPAADTDPYVSPAADTDPYVS
PAADTDPYITDVADWEKCPGSGSESSNDDDAVTEEIKNPSHMNNVASGHVCVGVVPSGKP
PVEKESLQTRPLKQKIPRAATIRVSRRKQAAASGGATQAAESSRRENVVSRSSWLDVWKG
RRHNVLWATLDGPLVSFWKKRTDKFTDLVFHVSSITNVCKQDKGRFSLYFCKKHFEFMAH
NKAVQEGWVTSLLASRGWDPPAPPEQHGALTMKDPRSNRVYAAICGHNLWIYNNKEDFQL
GVGLTFVSMNVASVKQTGRHNFSLITPYKTFNFSTDSSRELAVWLGSLNQVILSALSCSE
VAHRLWASPWNKVCADCGSANPEWASVNLLVVICEACAGQHRSLGIHVSKVRSLKLDSKV
WTEPLILLFVYYGNKAANDVWGHNVPGAEQILPDSSVGQRGDFIRAKYTKGRYRFTHPLA
SSQRLLNQRLCEVVCGPNVPETMSLLCSGARVLCHSGDSQCPTPISLAERAGQAMQTELL
RHNEYTDAPVYVHQVTGSLLGTSDPPPAAGEEELHGKLEEDRFLFSQENDSAACDVLDLR
EVISIFHSSNGSTHEFEMVTLTDALVCNADTEEDLLNHLLHILRVVLPGPIDEEELDGVF
AVSRVSLREGGGLQHTEVWAVLRGGQVLVYPTDQQRHRERLTLNPETQYKIDSSENTIEL
VTGERTMSMQFERHHSCQSWHSLLKRAVTTKRKQRPSLYELPPNAIGNVPPAIERCISHI
TQYGLKVDGLYRRCGLATKVSSLVEALSRSPKTAPLEKDEQGLLDAAGALKQYVRHQVVL
IPQTQRELWVKAAAHTEENLRLATYRRLLKKLPPDNRITLNALCGHFYIVQLYSVENRMT
AQNLALVFVPTLFQELAMNTNMVRLTRELIIHHTLLFLSKEQESDMESEELITKL
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctcccttcggtccagacatgcccgtgccagtacctaaaccacggactcgctac
aagcgggctggagggagcccacagatccagctctcttctgatcgggatttgatacatgat
acacctgacacaggaattcatagcagaggtattccacccgcaaatgatttgctggcagaa
aaggaagacaaccctgccattatcctaaataagcctgccattaccagcccagcggagcag
aatccaagccagtgtaacttccttctcttcagatctgattctggagtgactccatcttac
ccagtactggacagtaatggactctgtccatctgtctggttgtccttctctccacacagt
ccggctgcggatactgacccctacgtcagtccggctgcggatactgacccctacgtcagt
ccggctgcggatactgacccctacgtcagtccggctgcgaatactgacccctacgtcagt
ccggctgcgaatactgacccctacgtcagtccggctgcagatactgacccctacgtcagt
ccggctgcggatactgacccctacgtcagtccggctgcggatactgacccctacgtcagt
ccggctgcggatactgacccctacgtcagtccggctgcggatactgacccctacgtcagt
ccggctgcggatactgacccctacgtcagtccggctgcggatactgacccctacgtcagt
ccggctgcggatactgacccctacatcactgacgtagctgactgggaaaaatgccctgga
tctggatctgaatcgtccaatgatgacgatgccgttactgaagaaataaagaacccatcc
cacatgaacaatgtggcgtcagggcatgtttgtgttggtgttgtccccagcgggaaacct
cctgtggaaaaggagtctctgcagaccagacctctcaaacagaagatcccacgtgcggcc
accatccgtgtcagcaggagaaaacaggcagcagcgagcggtggtgctacccaggcagca
gagtcctctcgtagggagaatgtggtgtcccgatccagctggctggatgtatggaaggga
cgcaggcacaatgttctgtgggccaccctggatggaccgttggtatcattttggaagaaa
cgcacagacaagttcacagacctagtgttccatgtgtcaagcatcaccaacgtctgcaag
caggacaaaggacgcttctccctttacttctgcaagaagcactttgagttcatggcgcac
aacaaagcggtgcaggagggctgggtgacgtccctcctggcctctcgtggatgggacccc
ccagcccctccggagcagcatggagccctgaccatgaaggaccctcgcagcaacagagtg
tacgcggccatctgtggacacaacctatggatctacaacaacaaagaggacttccagttg
ggggttgggctgacctttgtgtccatgaacgtggcgtcagtgaagcagactggccgtcat
aacttcagtctcatcacaccgtacaaaaccttcaatttctccacagactcatcgagggag
ctggctgtgtggctggggagtctgaaccaggtgatcctcagtgccctgtcatgcagcgag
gtggcccaccgactctgggccagcccatggaacaaagtgtgtgccgactgtggcagtgcc
aaccccgagtgggcctcagttaacctgctggtggtcatctgtgaggcctgtgcaggtcag
catcgctctttgggcatccatgtctccaaagtgagaagcctgaagttggacagtaaagtg
tggactgaacctttgattctgctatttgtctattatgggaacaaagcagccaatgatgta
tggggtcacaatgtgccgggtgcagagcagatcctgccagactcctctgtgggtcagagg
ggggacttcatcagggccaagtacaccaagggccgatacagattcacccatcctctagcc
tccagccagagactgctcaaccagaggctgtgtgaggtggtgtgtggccctaatgtccca
gagaccatgtcattgctgtgctcgggggcccgggtcctgtgccactcaggggactctcag
tgccccacgcccatctccctggcagagcgggctggacaggccatgcagacggagctgctc
agacacaacgaatacacagatgcccctgtctatgttcatcaggtcacagggtctctgctg
ggcacctctgaccctcctcctgctgcaggagaggaggagctccatgggaagttggaggag
gaccgcttcctgttctcccaggagaatgactctgcagcctgtgatgttctggacctgagg
gaggtcatctccattttccacagctccaacggatcgactcatgagtttgaaatggtgact
ctgacggacgcgttggtgtgcaatgctgacactgaagaggatctactgaatcacctgctt
catattctcagggtggtgttgcccgggcccatagatgaggaggagctggacggggtgttt
gctgtgtcccgggtttctctgagggagggaggaggcctgcagcacactgaggtctgggca
gtgctccgtggaggtcaggtcctcgtctatcctactgaccagcagcgccacagagagagg
ctaacactcaaccctgagactcaatacaagatagattcctctgagaacaccatagagctg
gtcactggagagagaaccatgtccatgcagtttgaacgacaccacagctgtcagtcctgg
cacagcctactgaaacgggcagtgaccacaaagaggaagcagcgcccatcactgtacgag
ctgccacccaacgccattggcaatgtgccccctgccattgagaggtgtatctcacacatc
acacaatatggcctgaaggtggatgggctgtaccggcgctgtggcttggccactaaggtc
agcagtctggtggaagccctcagcagatcacctaaaactgcccctctggagaaagatgaa
cagggtctcctggacgctgcaggggccctgaagcagtatgtccgccaccaggtggtgctc
atccctcagacacaacgggaactgtgggtcaaggctgcagcccacacagaagagaacctt
agactggctacctaccgcagactcctgaaaaagctgccccctgacaacagaatcacactc
aacgccctgtgtggacacttctacatagttcagctgtacagtgtggagaaccgtatgaca
gctcagaacctggcgctggtgtttgtcccaacactgttccaggagctggccatgaacaca
aacatggtgcgcctcaccagagaactcatcatacaccacacactcctcttcctgagtaaa
gaacaagagtctgacatggagagtgaagaactcataacaaaattatag
DBGET
integrated database retrieval system
