KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139388618
Entry
139388618         CDS       T10872                                 
Name
(RefSeq) ras-related protein Rab-1A-like
  KO
K07874  Ras-related protein Rab-1A
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    139388618
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ocla04131]
    139388618
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ocla04147]
    139388618
   04031 GTP-binding proteins [BR:ocla04031]
    139388618
Membrane trafficking [BR:ocla04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Rab GTPases
    139388618
 Autophagy
  Other autophagy associated proteins
    139388618
Exosome [BR:ocla04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   139388618
  Exosomal proteins of other body fluids (saliva and urine)
   139388618
  Exosomal proteins of colorectal cancer cells
   139388618
GTP-binding proteins [BR:ocla04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab1/35 [OT]
    139388618
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 RsgA_GTPase Gtr1_RagA SRPRB Dioxygenase_N AAA_7 FeoB_N AAA_16 AAA_5 AAA_22 AAA_29 ABC_tran Septin
Other DBs
NCBI-GeneID: 139388618
NCBI-ProteinID: XP_070991488
LinkDB
Position
29:34284317..34291222
AA seq 201 aa
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESFISTIGVDFKIRTIELDGRTIKLQ
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYNNIKQWLQEIGRYASENVNKLLVG
NKCDLTTKKVVDYTTAKEFADSLSIPFLETSAKDATNVEQSFMTMAAEIKKRMGPGAPAG
GEKHNLKIDSTPVRQSGGGCC
NT seq 606 nt   +upstreamnt  +downstreamnt
atgaatcctgaatatgactacctgttcaagctgcttctgattggtgattcaggggtggga
aagtcctgcctcctgcttcgatttgcggatgacacctacacggaaagtttcataagcacc
atcggcgtggacttcaaaatccgaactattgaattggacggccggaccatcaaactacag
atttgggacactgctggtcaggagcggtttcgcaccatcacctccagctattacagagga
gcccatggtatcatcgttgtctatgatgtaacagatcaggagtcttacaacaatataaag
cagtggctgcaggagattggccgctatgccagcgagaatgtcaacaagctgctggtgggt
aacaagtgtgacctcaccaccaagaaggtagtagactacacgacagccaaggaatttgct
gactccctatccatccccttcctggagaccagtgcgaaggacgcaactaacgtggagcaa
tccttcatgaccatggcggctgagattaagaagcgcatggggcccggggccccggcagga
ggagagaagcacaacctgaagattgacagcactccagtgaggcagtctgggggaggatgc
tgttag

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