Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139388627
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Entry
139388627 CDS
T10872
Name
(RefSeq) claudin-7-B-like
KO
K06087
claudin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03272
Virion - Hepatitis viruses
ocla04382
Cornified envelope formation
ocla04514
Cell adhesion molecule (CAM) interaction
ocla04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
139388627
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
139388627
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
139388627
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
139388627
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ocla03037
]
139388627
04147 Exosome [BR:
ocla04147
]
139388627
Cilium and associated proteins [BR:
ocla03037
]
Other cilia and associated proteins
Stereociliary proteins
139388627
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
139388627
Exosomal proteins of colorectal cancer cells
139388627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Trp_oprn_chp
CyanoTRADDas_TM
TMEM37
OppC_N
Motif
Other DBs
NCBI-GeneID:
139388627
NCBI-ProteinID:
XP_070991500
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All DBs
Position
29:complement(27445783..27450038)
Genome browser
AA seq
210 aa
AA seq
DB search
MANSGLQILGFALSLLGLIGLIVGTILPQWKMSAYVGDNIITAVSMYQGLWMSCAFQSTG
QIQCKVYDSILQLDSALQATRALMIVGIIVTVAGLGVATMGMKCTNCGGDDKNKKSRIAM
TGGIVLLIGSLCATIACSWYANNIIKEFYNPFAPVNSKYEFGSAIFIAWAGAFLDIIGGA
MLAATCPKGKPKAKYPIASTRPPSSSKEYV
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atggccaactcgggactccagattttggggtttgccctgtcgctactgggtctgatcggg
ttaattgtcggcacaatccttccccagtggaaaatgtccgcctatgtcggggacaacatc
atcacagcggtgtctatgtaccagggattatggatgtcttgtgcatttcagagtaccggc
cagatccaatgcaaagtctatgactcaattctgcaacttgactctgcactccaggcaacg
cgtgccctgatgattgtgggcatcattgtgactgtggctgggctgggtgtggccaccatg
ggaatgaagtgcaccaactgtgggggagatgacaaaaacaagaagtctcgcatcgccatg
accggtggcatcgtcctgctgattggatctctgtgtgcaactatcgcctgctcgtggtat
gctaacaacatcatcaaggagttctacaacccattcgcccctgttaactccaagtatgag
tttggttcagccatcttcattgcctgggctggagcattcctggacataattggtggtgcc
atgctcgcagcaacctgccccaagggcaaacctaaggccaaataccccatcgcctccact
cgtccccccagcagcagcaaggagtacgtttga
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