Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139388647
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Entry
139388647 CDS
T10872
Name
(RefSeq) erbin-like isoform X1
KO
K12796
erbb2-interacting protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
139388647
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
PDZ
LRR_LRWD1
LRR_5
PDZ_6
PDZ_2
LRR_NXF1-5
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
139388647
NCBI-ProteinID:
XP_070991535
LinkDB
All DBs
Position
29:complement(14404814..14534784)
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AA seq
1433 aa
AA seq
DB search
MSSKRNLFVRLVPCRCLRGEEEAVTSLDYSHCSLETVPKEIFSLEKTLEELYLDANQIEE
LPKQLFNCQLLHRLSMPDNDLTVLPAAIANLVNLRELDVSKNSIQEFPENIKNCKVLAIV
EASVNPISKLPEGFTQLLSLSQLYLNDAFLEFLPASFGRLTKLQILELRENQLKMLPKSM
HKLTQLERLDLGSNEFTEVPEVLEQLTGIKELWMDGNRLTFLPGRLGSLKQLSYLDVSKN
NLEMVDEQICGCESLQDLLLSNNALTQLPGSIGSLKKLTALKVDENQLMYLPDSVGGLAA
LDELDCSFNEIEALPSSIGQCVSIRTFAADHNFLTQLPPEMGSWKSATVLFLHSNKLESL
PEEMGDMTKLKVINLSDNKLRNLPYSFTKLNQMTAMWLSENQSKPLIPLQKEEDQETHKT
VLTNYMFPQQTRTEDYIPSSDSESFNPSLWEEQRKQRAQVAFECDEDKDERETPPREGNL
KRYPTPYPDELKNMVKTAQSVAHRLKEDESGNESGKDARPSERNHVGVQDVGVKVIEAPC
ANGKPVEMEPKAPVCVQDSTAPLETSESYNSQKTSLRTSDNTRTMNHEDTLESFSLQDSE
ELSSEEEEMKMAEMRPPLIEITINQPKVVALSKNKKDDGKDADSLLDETVANSNQNNSNC
SSPSRMSDSVSLTTDSSQDNSLCTPEREAKMPFLPKSRQEDVNMNQRKESTPLLQNGNGS
ATSLQALLKTQQGYESKPEKMVVDYDLSMERLAFIEKGNNNGMGDAYTKWDQINMNLAKL
PPHPDNMVVQPDDRPNGSSAKEDFNHLPPPYNNDNSTAPITDHLKNGNQLGDHFNSHSSE
GLAVSPMRVDSATSMVRTASAGVTASSNMSLSRSTEELSPEKRCSPPVVAKAQSITNIEA
GGMKLYSLDAEGGSYEGGVVGRMAGAGPGAQGQSIVRSKSASLLNDQPFQVYSGSSASSS
DLLSSSSKPPVSTGRYPVPSGMAMGPPPQYNVQYSSSTMPKDGLWTQRTPVLPDQGFLPP
PQHSLANTNYSNRNQAPPYLLQAQQRGPPTGPTPGDMWAKERHLPLGGQPRSGTLQRQSS
SSSSMGDPRRMQVPEGEYMTYRDIHTLGRGPLAVAQAMQRPLSARTYSIDGPSTPRPQSS
RPQPHELPERTMSVSDFNYQHVSPSKRPNARVKSEHSLLDGPGGPGAGGRVPVDWRDQVM
RHIEAKKMEKNALSRSYNSNYAPLSCSHYGSSRDVHHSGSQGSLVFSAAADGRPYGAQGH
CDDVFGPQGQQGYTMDTLRQVPSLNGQLGGPVRGQMTSCQTPMARHPSREQLIDYLMLKV
SHGQQPQGPPPPRADHDTLQQEFRVKVEKNPELGFSISGGVGGRGNPFRPDDNGIFVTRV
QPEGPASKILQPGDKILQANGYSFVNVDHGNAVALLKTFPTTVDMIIVRELAA
NT seq
4302 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcaagcggaacctgtttgtgcgtctggtgccgtgccgctgcctgcggggggag
gaggaggcggtgacgtctctggactactcccactgcagcctggagactgtgcccaaggag
atcttcagcttggagaagaccctggaggagctctacctggacgccaaccagatcgaggaa
ctgcccaaacaactgttcaactgccagttgctccacaggctgagcatgccagacaatgac
ctcacggtgctgcctgcggccatcgccaacctcgtcaatctcagggagctggacgtcagc
aagaacagtatccaggagtttccagaaaatatcaagaactgcaaagtcctggctatcgtt
gaagcgagtgtgaatcccatctccaagctcccagagggtttcacccagctcctcagcctg
tcacagctctacctgaatgacgccttcctcgagttccttccagccagcttcggcaggttg
actaaactgcagatcctggagctgagagagaaccagttaaagatgctgccaaaaagtatg
cacaagctcacccagttggagaggctggacttggggagtaacgagttcactgaagtgcct
gaggtattggagcagctcactggaatcaaagagctgtggatggatggaaacagactgacg
ttcctaccagggaggctgggctctctgaagcagctgtcctacctggacgtgtccaagaac
aacctggagatggtggacgagcagatctgtggctgtgagagcctgcaggacctgctgctc
tccaacaacgcactcacacagctgcccggatccataggctccctgaagaaactaaccgct
ctgaaagtggatgagaaccagctcatgtatcttcccgactctgtcggagggctggcagcc
ctggatgagctggactgtagttttaacgagattgaggctctgccctcctccatcggacag
tgtgtcagcatacgcaccttcgccgctgaccacaacttcctcacacagctgcccccagag
atgggcagctggaagagtgccaccgtgttgttcctgcactccaacaagctggagtctctg
cccgaggagatgggagacatgaccaagctcaaggtcatcaacctcagtgacaacaagttg
aggaatcttccctacagcttcacgaagctcaaccagatgactgctatgtggctgtctgag
aaccagtcgaagcccctcatccctctgcagaaggaggaggatcaagaaacccacaagaca
gttctcaccaactacatgttcccccagcagaccaggacagaggactacatccccagctct
gacagcgagagctttaacccctccctgtgggaggagcagaggaagcagcgggcccaggtg
gccttcgagtgtgacgaggacaaggatgagagggagacgcctccacgggagggcaacctg
aagcgctacccgacaccatacccagacgagctgaagaacatggtgaagacggcccagtca
gtcgcccacaggctgaaggaggacgagtcaggcaacgagtcagggaaggatgccagacct
agcgagcgtaaccatgtgggagtgcaggacgtgggagtcaaggtgattgaggctccctgt
gccaacggcaagccagtggagatggagcccaaagcgcctgtctgtgtccaggactccacg
gcacccctggagacctctgaatcctacaactcccagaagacctctctccgaacctccgac
aacaccaggaccatgaaccatgaggacaccctggagtctttttctctgcaggactccgag
gagctttcgtctgaggaggaggagatgaagatggcggagatgagacctcctctgatcgag
attaccatcaaccagcccaaagtggtggccctaagtaagaacaaaaaagatgacggtaaa
gacgctgactcgttgctggacgagacggtggccaacagcaatcagaacaacagcaactgt
tcgtccccgtcgcgcatgtcggactctgtgtctctgaccacggacagcagccaggacaac
tccctgtgcacccccgagagagaggccaagatgcccttcctacccaaaagcaggcaagag
gatgtaaacatgaaccagcggaaggagagcacccctctcctccagaacggcaatggctca
gccacgtccctgcaggccctcctgaagacccagcagggctacgagtccaagcccgagaag
atggtggttgactatgacctgtccatggagaggctggccttcatcgagaagggcaacaac
aacggcatgggtgacgcctacaccaagtgggaccagatcaacatgaatttggccaagctg
ccacctcacccggacaacatggtggtccaaccagacgaccgcccgaacggctcaagcgcc
aaggaggactttaaccacttgcctcccccctataacaatgacaactctacggcgcccatc
acggaccacttgaagaacggcaaccagctgggcgaccacttcaatagccactccagcgag
ggactggctgtgtcgcctatgagggtggactctgccacgtcgatggtgcggacggcttct
gcgggcgtgacggccagcagcaacatgtctctgtctcgcagcacggaggagctgtccccg
gagaaacgatgctcccctcctgtagtggcgaaggctcagagcatcaccaacatcgaggcg
ggggggatgaagctgtactccttggacgctgaggggggctcctatgagggtggcgttgtg
ggcaggatggccggagccggcccgggagcccagggccagagcatcgtccgcagcaagtca
gcctccctgctcaacgaccagcccttccaggtctactccggttcctcagcttcctcctcc
gacctgctctccagctcctccaagccccccgtcagcaccggccgctaccccgtcccctct
ggcatggccatgggcccgccgccccagtacaatgtccagtactccagcagcaccatgccc
aaagacggcctgtggacccagaggacccccgtcctccccgaccagggcttccttcctccg
ccccagcattctttggccaacaccaactactccaaccgcaaccaggctcctccctacctc
ctccaggcccagcagagaggcccgcccacggggcccacgcccggtgatatgtgggctaag
gagagacacctgccactcggaggtcagccacggagcggcacccttcagaggcaaagcagc
agcagttcctccatgggggacccccggcgcatgcaggtgcccgagggagagtacatgacg
tacagggacatccacaccctgggccgggggccgctggccgtggctcaggccatgcagagg
cctctgtcggcccgtacctacagcattgacgggcccagcaccccaaggccccagagctcc
aggccacagccccacgagctgcccgagaggaccatgtcagtcagcgatttcaactaccag
cacgtcagccccagcaagaggcccaacgccagggtgaagtctgagcactcgttgctggat
gggccgggaggaccgggagcaggaggaagggtaccggtggactggagagatcaggtgatg
cgccacatcgaggccaagaagatggaaaagaacgccttgtctcggtcctataattccaat
tacgccccgctgagctgctcccactacggcagctctcgggacgtgcaccactctggcagc
caaggctctctggtctttagtgctgccgcagacggacggccctatggagcccagggccac
tgtgatgacgtgtttggacctcaagggcagcagggctacaccatggacaccctccgacaa
gtgccttcgttgaacggtcagctgggcggtccggtgcgtggccagatgacgtcgtgccag
acgcccatggcccgccacccctccagagagcagctcatcgactacctgatgctcaaggtc
tcccatggccagcagccccaggggccccctccaccacgggccgaccacgacacactgcag
caggagtttcgtgtcaaagtggagaagaacccagagctcgggttcagtatatcaggagga
gtaggaggacggggaaacccttttcgtccggacgataatggcatctttgtgacaagggtc
cagcctgagggacctgcctccaagatactccagcctggagacaagatcctccaggcaaac
ggatatagctttgtgaacgttgaccatgggaatgccgtggccctgctgaagacatttccc
accactgtggatatgatcatcgtccgagagttggcggcgtag
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