Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139388757
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Entry
139388757 CDS
T10872
Name
(RefSeq) beta-1,4-galactosyltransferase 4-like
KO
K07969
beta-1,4-galactosyltransferase 4 [EC:
2.4.1.90
2.4.1.275
2.4.1.-]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00533
Glycosaminoglycan biosynthesis - keratan sulfate
ocla00601
Glycosphingolipid biosynthesis - lacto and neolacto series
ocla01100
Metabolic pathways
Module
ocla_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00533 Glycosaminoglycan biosynthesis - keratan sulfate
139388757
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
139388757
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ocla01003
]
139388757
Enzymes [BR:
ocla01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.90 N-acetyllactosamine synthase
139388757
2.4.1.275 neolactotriaosylceramide beta-1,4-galactosyltransferase
139388757
Glycosyltransferases [BR:
ocla01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
139388757
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
Motif
Other DBs
NCBI-GeneID:
139388757
NCBI-ProteinID:
XP_070991762
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All DBs
Position
29:32511200..32518375
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AA seq
355 aa
AA seq
DB search
MGVCPAVSMFFRKCKYMILLLLSVSVLAWYATFSGETVKAIQGTLLPVQTLADNTEVLSG
GEGNSWRSVTQVFSNPLPDTSPPKQSCPEKSPLLQGALNLTFEDSLTLKEVESENSRVAE
GQYQPPDCLAQQSVAILIPHRNREKHLLYLLHHLHPFLQRQQLHYSIYVIHQAGEVTFNR
AKLLNVGYLEALKDYDWDCFVFHDVDLVPENDYNLYKCDQQPKHLVVGRNATGYKLRYKG
YFGGVTAMTKDQFHKVNGFSNTYWGWGGEDDDLRIRVELQKMEIIRPPPLIARYTMVFHK
RDSGNEINKDRMRLLARTPKVWRKDGLNTCSYSTLSVERPPLYINVTVDIGEPMH
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgggagtctgtcctgctgtgtccatgtttttccgcaagtgcaagtatatgatactgttg
ctgctctccgtttccgtcttggcttggtacgccactttttcaggtgaaacagtgaaagca
attcagggaacccttttgccagtgcaaacacttgctgataatactgaggtcctgagtgga
ggagaaggaaactcgtggagatcagtgacacaggtcttctccaatcctctccctgacacc
tcaccaccaaaacaaagctgtcctgagaaatcgccactgctccagggagccctaaacctc
acatttgaggactctctaacgcttaaggaggtggagagtgagaacagtagagtggctgag
ggccaataccagcctccagactgcctcgcccagcagagtgtggctatcctcattccccat
cgtaaccgggagaaacacctcctctacctcctgcatcacctgcaccccttccttcagagg
cagcagctgcactacagcatctacgtcattcaccaggctggagaggtgacgtttaaccgt
gccaagctacttaatgttgggtacttggaggcactcaaggactacgattgggattgtttc
gtttttcatgatgtggatctggttccagagaacgactacaacctatacaagtgtgaccaa
cagcccaaacacttagtggtcggcaggaacgccacagggtacaaattgcgatacaaaggg
tactttggaggggtgacggccatgacgaaggaccagtttcacaaagtgaacggcttttca
aacacttactggggatggggtggggaggatgatgaccttcgcatcagggtggagctccag
aaaatggaaattatacgacccccccctctcatagcacgctataccatggtatttcataaa
agagatagcggcaatgaaatcaataaagacaggatgcgtttgctagcacggacacctaaa
gtctggagaaaggatggccttaacacctgctcctacagtactctatcagttgagaggcca
cctctgtacattaatgtcaccgttgacattggcgaaccaatgcactga
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