Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139388775
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Entry
139388775 CDS
T10872
Name
(RefSeq) junction-mediating and -regulatory protein-like
KO
K24045
junction-mediating and -regulatory protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139388775
Membrane trafficking [BR:
ocla04131
]
Autophagy
Other autophagy associated proteins
Others
139388775
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JMY
WHAMM-JMY_N
WH2
PEPCK_PPi_lobe_2
Motif
Other DBs
NCBI-GeneID:
139388775
NCBI-ProteinID:
XP_070991791
LinkDB
All DBs
Position
29:6893761..6942892
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AA seq
921 aa
AA seq
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MSFMMEDSVESDWVAVRPNVFDEKERHKFVFIVAWNEIEGKFAITCHNRTVQKRSAFRDS
LLEDVECDLGSPATLAPEADKRKTPLKSPTKRKDDICALIKVRSNVKPKGKSPTKSPIRE
NTAAVGASSRPAESVIKTLTLGSWDIVPSKITDIEVLEPADVSGLPRSSDDGEESDSSRE
GYSWAGLFAFQDVRAAHVQLCAVNSDLEPCLPPFPEEQSGMWTVLFGAPEVSQRETDALC
YQLQVYLGHALDTCGWKILAQVLFTESDDTEEYYESLSELRQKGYEEALQRAKKRLQELL
ERHRAMESMVELLQVYPEEDEAYGELLEATTQLYHYLLQPFRDMRELAMLRKQQIKISLE
TERLGPRRVEGLRREDEEWTRKAHAAVLSIQDLTVKFFETTARAQKAVYERMRVDQRKFG
KAAWAAAVDRMERLQYAVSKETLQLMRAKEICLEQRKHGLKQEMQNLQEGEDAMLRLDQM
EALYYELQLQLYDIQAEVLRCEELLLNAQLTSLRRQITERQDEVVYYDAYESPDAMQGVE
EPSAPPPSLRDEFSQLQQRTRQLEARRGRITTKKVYLKNKKEICIINHNQKIQQRQGSQD
DQTSHQALQQRGEEQEEEEEERSNTKMSLDRSRTLDRLRSFKQRFPGQVTLKSSRLLMSH
GQSRKKTISSSPLSPAGRPETLAASVQTDTADLSELSAPSSDACGHQSVSLTLLGGATGP
LSAPSSLTPLSVLPSSAPPPPPPPPPPPSLEDLSSEGGERAHPTSPVRQSKSGLDSEPLP
LAPFSPRFFDSSQLQTARKKLKKTASLDSSQWRRASSPMDEVLNSLKRGSFHLRKAELRV
LAPDPDDDESNNILAQIRQGVRLRKVRTRPDQQRHPKGSFPHSADALTRSIHEALRRIKE
ASPESESEDEGLPCTDWDSDL
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcatgatggaggattctgtagagtcggactgggtggccgttcgaccaaatgtt
ttcgacgaaaaggaaagacacaaattcgtttttatcgtcgcttggaacgagatcgaggga
aagttcgccataacctgccacaatagaacagtacagaaacggtctgcgtttcgggattcg
ctcttggaagacgtcgaatgcgacctcggatcccccgccacactagcgcccgaggcagac
aaacgcaaaactccactaaagagtcccaccaaaagaaaagatgacatctgcgcattgatt
aaagttagatctaatgtcaaaccgaaagggaaaagtccgacaaagagccccattcgagag
aatacagccgcggtaggtgcctcatcaaggccagccgagagtgttatcaaaacacttacc
ttagggtcgtgggacatcgtgccctctaagataaccgacatcgaggtcttggaaccagcg
gatgtctctgggttgcctcgctcctcggacgatggagaggagtcggatagcagccgagag
ggctacagctgggcaggtctgttcgccttccaggacgtgcgggcagcccacgtccagctc
tgcgctgtcaactcggacctggagccctgtctgcctccttttcccgaggagcagtcaggc
atgtggacggtgctatttggggcccctgaggtatctcaacgggagacggacgctctgtgt
taccaactacaggtgtacctgggccatgctctggacacctgtggctggaagattcttgcc
caggtgctatttacagagagtgatgacacagaagagtactatgagagtttgagtgagctg
agacagaagggatatgaggaggctctccagcgggccaagaaacggctccaagagctgctg
gagaggcaccgggccatggagagtatggtggagctgctgcaggtgtatccagaggaggac
gaggcctacggagagttactggaggctacaacacaactctaccactacctactgcagccc
ttcagagacatgagagaactggccatgctgcgcaaacagcagatcaagatctccctggag
acggagcgtctggggcctcgtcgcgtggaggggctgaggagggaggatgaggagtggacg
aggaaggctcacgctgccgtcctctccatacaggatctcaccgtcaagttcttcgagacc
accgccagggctcagaaagcggtttacgagcggatgcgtgtggaccagaggaagtttggc
aaggcggcgtgggctgcagccgtggaccgcatggagcgtctgcagtacgccgtgtccaag
gaaacactgcagctgatgagggccaaggagatctgcctggagcagaggaaacatggcctg
aaacaggagatgcaaaacctgcaggagggagaggatgccatgttgcggttggaccagatg
gaggcgctgtactatgagctccagctgcagctctatgacatccaggctgaggtgctgcgc
tgtgaggaactgctgctcaatgcccagctcaccagtctacgcagacagatcactgagcgc
caggatgaggtggtgtattatgatgcgtatgagagtcctgatgccatgcagggggtggag
gaaccctcagctccccctccgtctcttcgagacgagtttagccagctgcagcagaggacc
agacagctagaggcacgcaggggacgcatcaccaccaagaaggtctaccttaagaacaaa
aaggagatctgtatcatcaaccacaaccagaagatacagcaacgccagggtagtcaggac
gaccagacatcacatcaagcgctgcaacagcgaggggaggagcaggaggaagaggaggag
gagaggagtaacaccaaaatgagtctggatagatcaagaactctggacagactacgcagc
ttcaaacagcgtttccctggtcaggtgactctgaagtccagcagactgcttatgtctcac
ggccagtcccggaagaaaaccatctcctcctcccccctctcccctgcggggaggcctgag
accctagctgccagtgtccagacagacaccgctgacctctcagaactctctgccccttcc
tctgatgcctgtggtcaccagagtgtctctctaaccctgctaggtggtgccactgggcct
ctctctgccccctcctctctaactcctctctcagtgctcccgtcctctgcacctccacca
cctcctcctcccccaccccctccctccttagaggacctctccagtgaaggaggggagcgg
gctcaccccactagcccagttcgccagtccaaatctgggttggattcagagcctctccct
ctggctcctttctccccacggttctttgacagcagtcagctgcagacagccaggaagaaa
ctgaagaagaccgcctcgctggactcctcacagtggaggagagcgagttcccccatggac
gaggtcctgaactccctcaagcgaggcagcttccacctgcggaaggcagagctccgggtc
ctagcccccgatccagacgatgacgagagcaacaacatcctggcccagatcaggcagggc
gttaggctgaggaaggtgcggacgcggccggaccagcagcggcaccccaagggctcgttc
ccccactctgccgacgctctgacccgctccatccacgaagccctgagacgcatcaaggag
gcttcgcctgagtccgagtctgaggacgagggcctgccctgcaccgactgggactctgac
ctttga
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