Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139388955
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Entry
139388955 CDS
T10872
Name
(RefSeq) U2 small nuclear RNA auxiliary factor 2a isoform X1
KO
K12837
splicing factor U2AF 65 kDa subunit
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03040
Spliceosome
Brite
Spliceosome [BR:
ocla03041
]
Complex A
U2 snRNP components
U2 related factors
139388955
Complex B
139388955
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NCBI-GeneID:
139388955
NCBI-ProteinID:
XP_070991853
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Position
3:complement(15503291..15515247)
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AA seq
501 aa
AA seq
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MSDFDEFERQLSENKQAQLVEHGACNARIGRSIPGNTPEKDKENRHHRRSPSRSRSRERK
RRSRDKDRRSRDRRGDSKERRPRRSSPSQQQPQEIAVSRSPHRETKKKNKVKKYWDVPPP
GFEHISVMQYKAMQAAGQIPATALLPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIP
FGITEESMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGI
IFQGQSLKIRRPHDYQPLPGMSENPSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKE
LLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDVNLNDQITMENQAIAGLNGMQLGDKKLL
VQRASVGSKNATLTSINQTPVTLQVPGLMNSSMTQMAGLPTEVLCLMNMVAVEELVDEEE
YEEIVEDVRDECSKYGQVKSIEIPRPVDGLEVPGTGKIFVEFMSVFDSQKAMQGLTGRKF
ANRVVVTKYCDPDAYHRRDFW
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatttcgacgaattcgagagacaactgtctgaaaacaaacaagctcagttggta
gagcatggcgcttgcaacgccaggatagggcgctcgattcccgggaacaccccggagaag
gacaaggagaaccgccaccaccgtcgctccccctctcgcagccgcagcagagagaggaag
aggaggagcagagacaaggacagacgcagcagggatcgccgtggagacagcaaggagcgc
agaccgagacgcagctcaccatcccaacaacaaccccaagagattgctgtaagtcgttcc
ccgcaccgtgaaacgaagaagaagaacaaagtgaagaagtactgggacgtccctcctcct
ggctttgaacacatcagtgtgatgcagtacaaagccatgcaggctgcgggtcagatccca
gccacggccctgctgcccaccatgaccccagacggcctggccgtgacccccactcccgtc
cctgtggtgggaagccagatgaccagacaggcccgtcggctttatgtgggcaacatcccc
ttcggcatcacagaggagtccatgatggatttcttcaatgctcagatgcgtctgggtggt
ctcactcaggctccagggaaccccgtcctcgctgttcagatcaaccaggacaagaacttt
gccttcctcgagttccgctcagtggatgagacaacccaggccatggcgttcgacggcatc
atcttccagggacagagtctgaagatccgccgtccccatgactaccagcccctgcccggc
atgagcgagaaccccagcgtctacgtgcctggcgtggtgtccacagtggtgcctgactcg
gcccacaagctgttcatcgggggcctgcccaactacctgaatgatgaccaggtgaaggag
ctcctgacatcgtttgggcctctcaaggcctttaacttggtcaaggatagtgccacaggt
ttgtctaagggttatgcgttctgtgagtatgtagacgtcaacctgaacgaccagatcacc
atggagaatcaggccatagcaggactcaacggcatgcagctgggagataaaaaactcctg
gtgcagagagccagcgtgggatccaagaacgccactctgacaagtataaaccagaccccg
gtgacgctgcaggtgccgggcctgatgaacagctcaatgacccagatggctggcctgccc
acagaggtgctgtgtctgatgaatatggtggctgtggaggagctggtggatgaagaggaa
tatgaggagatcgtggaggatgtgagggacgagtgcagcaagtacggccaggtcaagagc
atcgagatccccagacctgtggatgggctggaggtccctggcactggcaagatctttgtg
gagttcatgtcagtgtttgactcccagaaggccatgcagggtctgacgggcaggaagttt
gctaaccgggtggtggtgaccaaatactgcgaccctgatgcctaccaccgccgagacttc
tggtag
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