Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139389286
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Entry
139389286 CDS
T10872
Name
(RefSeq) ubiquitin-protein ligase E3B-like
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04120
Ubiquitin mediated proteolysis
Brite
Enzymes [BR:
ocla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
139389286
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
HECT type E3
139389286
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GFIT
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NCBI-GeneID:
139389286
NCBI-ProteinID:
XP_070991974
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Position
30:7618965..7641267
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AA seq
1065 aa
AA seq
DB search
MFSAAQSSKSEFLDKARQAREERKGYKARDRAATLIQALVRRFLCRCRLQKQIRKEVDDL
FQDAGTTKRNALSIFKIARKLLFIFCQDDKLRFEKLCRSILGSMDVENEPKVWYVSLALS
KDLTIPWIKQIKDLLWISCQFLKKLKPDIMQDNKLVTLYLTMLVTFTDTSTWKIVRGKGE
ALRPALTRICENIMGHLNQKGFYSILQILLTNGLARSRPSLTKGTLTAVFTLALRPVIAA
HFSDNLLRSLLIHIMSVPAVVSHIYTITPECMTTIQTHDLLRKFILFLSCEEQCVDICVC
LEGSHTLCLLGNLIHLGYLNEKVLEEEANHFVTELTDMLSYCQRYVSQKKSNLTHWHPVL
GWFSQTVDYGLNESMPLVTKQLQYLWGMPVIRTLFSDVLSKKLETQEATPPPQPTTSQNN
LPVKSLFKRAFQKSASVRNILKPVGGRRVDSAEVQKVCSICVLYQTALTTLTQIRLQILT
GLTYLDDLLPKLWAFICELGPQGGLKLFIECLNNDTEESKQLLAMLMLFCDCSRHLITIL
DDIEVYEEQISFKTEELVTISSFLNTFVYKMVWDGILENAKGEKLDLFHSVHGWLMVLYE
RDCRRRFSPDDNWLRKDLKPSLLFQELEKGKRRAQLLLQYIPHVIPHKNRVLLFRNIVTK
EKETLGLVETSSASPHVTHITIRRSRMLEDGYDQLRRLPVNSIKGVIRVKFVNDLGVDEA
GIDQDGVFKEFLEEIIKKVFNPALNLFKTTSGNERLYPSPTSYIHENHLQLFEFVGKMLG
KAMYEGIVVDVPFASFFLGQVMGHHHSTFYSSIDELPSLDSEFYKNLTSIKRYDGDVGDL
GLTLSYDEDVMGQLVCHELIPGGKTMPVTNENKISYIHLMAHFRMHTQIKEQTAAFIRGF
RSIINPEWLHMFSTPEVQRLVSGDNAEIDLDDLKKHTVYYGGFHSSHRVIIWLWDILSSD
FSSEERAMFLKFVTSCSRPPLLGFAYLKPPFSIRCVEVSDDQDTGDTLGSVLRGFFTIRK
KEPGGRLPTSSTCFNLLKLPNYSKKSILRDKLRYAISMNTGFELS
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtgcagctcagagttccaagtctgagtttctggacaaagccaggcaggcacgt
gaggagaggaaggggtacaaagcaagggacagagcagccaccctaattcaagcactggtc
aggagattcctctgtcgctgcagactccagaaacaaataaggaaagaagttgatgactta
ttccaagatgccgggaccacaaaaagaaacgcactatccatttttaaaattgcacggaag
ttactattcattttttgccaagatgataagttgagatttgagaagctttgtcgctccatt
cttggcagcatggatgttgaaaatgagcccaaagtttggtatgtgtcattggctctttct
aaagacctcaccatcccttggatcaagcagattaaagatctcctgtggatctcctgtcag
ttcctgaaaaaattaaagcctgacatcatgcaggacaataagctggtgactctgtacctc
accatgctggtgactttcacagacacatcaacctggaagatagtgagagggaaaggcgag
gccctcagaccagcattgacccggatctgtgagaacatcatggggcatctcaatcagaag
ggattttattcaatactgcagattctactcaccaacggattggcacgctcgagaccctca
cttaccaagggcacactcacagcagtattcacactggcattaagacctgtcattgctgct
cacttctctgacaacttgctgaggtctctcctcatccacatcatgtctgtcccagcagtt
gtctcccacatctacaccatcaccccagagtgcatgaccaccatccagacccacgacctg
ttgaggaagttcatcctgttccttagctgcgaggagcagtgtgtcgacatctgtgtctgc
ctggaggggagccacacactgtgcttactgggtaacctgattcacctgggctacctcaac
gagaaagtactggaggaggaggccaaccactttgtgacggaactgacggacatgctgtcc
tactgccagagatacgtgtcgcagaagaaatctaacctcacccactggcaccctgtcctt
ggctggttctcccaaaccgtagactacggtctgaatgagtccatgccactggtcacgaag
cagttgcagtacctgtggggcatgcctgtgatccggactctcttcagtgacgtcctcagc
aaaaagctggagacccaagaggccacgcctccgccacaacctaccacatcccaaaacaac
ctgccagtcaagagtctattcaagcgggcatttcagaagtctgcctcagtacgaaacatc
ctgaagccagttggcgggagacgggtggactccgcagaggttcagaaagtgtgcagtatc
tgtgtactgtaccagacagccctcaccacgctcacccagatacgactgcaaatccttact
ggcctaacctacctggatgacctgctgcctaagctgtgggccttcatctgcgaactagga
ccccaaggagggctcaagctgttcatagagtgcctgaacaacgacacagaggagtctaaa
cagctgctagccatgctcatgctgttttgtgactgctccagacacctcatcacgatcctg
gatgacattgaagtttacgaagagcagatctcgtttaagacggaggagcttgtaaccatc
tcctcatttctcaacacgtttgtttacaagatggtctgggatggcattttggagaatgcc
aagggagagaagctggacctgttccacagcgttcacggctggctgatggtgctttacgag
cgggactgcaggagaaggttctcccctgatgacaactggctgcgcaaggatttaaagcct
agccttttgttccaagagctggagaagggcaagaggagagctcagctgttacttcagtac
atcccacatgtcattccacacaaaaacagggtcctgctgttccgaaacattgtcaccaag
gagaaggaaaccttgggattggtggagaccagctccgcctctccgcatgtcacccatatc
accattcgccgctcacggatgttagaggatggttatgaccagctccgccggttgcccgtc
aactccatcaaaggtgtgatccgcgtgaagtttgtcaacgacctgggtgtggacgaggcc
ggcatcgaccaggacggcgtcttcaaggagttcctggaagagatcatcaagaaagtcttt
aatccggctctcaacctctttaagaccaccagtggcaatgagaggctgtacccctcccct
acgtcctacatccacgagaaccacctgcagctctttgagtttgtggggaagatgctcgga
aaagccatgtatgagggtatcgtggtagacgtacccttcgcctccttcttcctcggccag
gtcatgggccaccatcacagcactttctacagctccattgacgagctgccctccctggac
tctgagttctacaagaacctcacctccattaagcgctacgacggggatgttggtgatcta
ggactgacgctatcgtatgacgaggatgttatgggacagctggtctgtcatgagctgatt
cctggaggaaagacgatgccagtcaccaatgaaaacaagatcagctatatccacctgatg
gcgcacttccgcatgcacacgcagataaaagagcaaacggcagctttcatccgagggttc
cgcagcatcatcaacccagagtggctgcacatgttctccacccccgaggtccagcgcctc
gtctccggggacaacgccgagatagatctggatgacctcaagaaacacacagtgtactat
ggaggtttccacagcagccatcgggtcatcatctggctgtgggacatcctgtccagtgac
ttctcctctgaggaaagggccatgttcctcaagtttgtcaccagctgttcgagaccaccc
ctcctgggttttgcctacctcaagccccctttctccattcgctgtgtggaggtgtccgat
gatcaggacacgggggacaccctgggcagtgtcctgcggggtttcttcaccatccggaag
aaggagcctggcggccgcctccccacctcatccacctgcttcaacctgctcaagctgcct
aactacagcaagaaaagcatcctgcgtgacaagctccgctatgccatcagtatgaacaca
ggttttgagctctcctaa
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