Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139389290
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Entry
139389290 CDS
T10872
Name
(RefSeq) zinc finger CCHC domain-containing protein 8-like
KO
K13128
zinc finger CCHC domain-containing protein 8
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ocla03041
]
139389290
Spliceosome [BR:
ocla03041
]
Complex C
Other components
Complex C specific factors
139389290
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PSP
zf-CCHC
KASH_CCD
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
139389290
NCBI-ProteinID:
XP_070991988
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Position
30:complement(20024018..20032009)
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AA seq
729 aa
AA seq
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MAEIDFGDSELFEQLGEIMPTATHIRFTEDGEEGSELKGRLGECEETIRRLIEENQELKR
KLKVLTRPSGINVENIKIDGPLLHILFANNNISKQCRQEIEDCLCCIVQKQQQQGEVEKG
NPYVNVNPQSSSFIMEEDQKTKTSCGIQKIKEAFSMVGSVLYFTSFCLDKLGQPLLNDNP
QQTEGWEVPKYQQIFSQVIALDGQEVQMKEKRAKPCCFNCGLDGHQLRDCPQPKDMARIN
KKRKEFCHGNQGNLSNQRYHADEVEERFAKYKPGFISENLLSALGVDMNTLPPHIYRMRQ
LGYPPGWLKEAEMENSGLMLYDGKVSSDEEPKEDNGPNISYDVSKLVDFPGFNISSPPSV
KDDYRLYGSIPMQHNHMKQNFAAYLSNNFPMPGANCNKRPHESYSTPRQTKKRRSDARSS
DMDFDSDQDTTPRRHRSSDSFEFQPPLPPGSPSFGSPPPLPHGTPPATPTPPPLPKGTPP
PTPTNGSRALRGCTARGSEESAGGEEEELTLEELEEQQRLIWAALENADTATNSDSETPA
VGTPLPSSPSISTPAHVDTETEIEDGETEDNEEKEGSMEAASHNSDEQISVETSSSKCQD
YEEDAEDKGKVVENKGSLLQSPDEEEGPQSPEAATDGGNVLAQKVRLLQTPVHQVSRQSD
PSGQDAMEGDLSDSLGNVMAVPHRSRFAQGIIPFEDTPEFTEVAEATGTYLRIRDLLKGS
PRNMAKIKK
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggccgagatagattttggtgacagtgaactctttgagcaattgggagagattatgcct
actgcaactcacattcggttcacggaggatggagaagaaggctctgagctcaagggaaga
ttgggggagtgtgaggaaacaatacggaggttgatagaagagaaccaagagttgaagaga
aaattgaaagtgttgacaaggccaagtggcattaatgttgaaaacatcaagattgatggt
cctcttctacacatcctttttgcaaacaataacatctcaaagcaatgccgtcaagaaatt
gaagactgcctttgttgtattgttcagaaacagcagcagcagggagaagttgaaaaagga
aatccctacgtaaatgtcaaccctcagtcttcaagtttcattatggaagaagatcagaag
accaagacctcctgtggaatccaaaagattaaggaggccttcagtatggtgggaagtgtc
ctgtatttcaccagtttctgtctggacaaacttggacagcccctgctaaatgataacccc
cagcagacagaaggatgggaggttccaaaatatcagcagatcttcagccaggtcattgcc
ttagatggacaagaagtacagatgaaagagaaaagagctaagccttgttgtttcaactgt
gggttggatggtcatcaacttcgagactgtcctcagccaaaggacatggccagaatcaac
aagaagcggaaggagttttgtcacggtaaccagggaaacctgagcaatcagcgttaccat
gctgatgaagtggaggagcgatttgccaaatacaaacctgggttcataagtgagaacctg
ctgtctgccctgggagttgatatgaacacactaccacctcacatctaccgcatgaggcag
ctaggctacccacctggctggcttaaggaggcagagatggagaactccggtctcatgctt
tatgatgggaaggtttcaagtgatgaagaaccaaaagaggacaatggaccaaacatctcc
tatgatgtttccaagcttgtagatttcccaggcttcaatatatcttcaccccctagtgtg
aaggatgactacagactatatggctctattccaatgcagcataatcacatgaagcagaat
tttgctgcttatctctctaacaattttccaatgcctggtgccaactgcaataaaagacca
catgaatcctactcaactccccggcagacaaagaaaaggagatctgatgccaggagttca
gatatggactttgattcagaccaggatactacaccccgccgccaccggagctcagacagc
ttcgaattccagcccccgctgccccctggctcaccatcctttggttcaccccctccctta
cctcatggtactccgccagctactcccacaccacctcctcttcctaagggaacacctccc
cccacacccacaaatggctcaagggccctgcggggatgcactgcgagagggagtgaggag
tctgcaggcggggaggaggaagagctgacactggaagagctggaggagcagcagaggctg
atctgggcagcattggaaaatgctgacacagccaccaacagtgactctgagacaccagct
gttggaacacccctccccagctcacccagcatctccacacctgcccatgttgacactgaa
actgaaatagaggatggtgagactgaagataatgaggaaaaggagggatctatggaggct
gccagccataacagtgatgagcagatcagtgttgagacatcttctagcaaatgtcaggat
tatgaggaagatgctgaagataaaggcaaggtggttgaaaacaagggcagcttactgcaa
tcaccagatgaagaagagggccctcagagccctgaagctgccacagatggaggcaatgtg
cttgcacagaaggtcagattgctgcaaacgccagtgcaccaagtgagtcgtcagtcggat
ccctcaggtcaagatgctatggagggagatctgtctgactctttggggaatgtaatggcc
gtgcctcaccggagtaggtttgcacagggcattattccctttgaggacacgccagaattc
acagaagttgctgaggccaccgggacataccttcgaatccgagacttgttgaaaggttcc
ccccgaaatatggcgaaaatcaaaaagtga
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