Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139389302
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Entry
139389302 CDS
T10872
Name
(RefSeq) ARF GTPase-activating protein GIT2-like isoform X1
KO
K12487
G protein-coupled receptor kinase interactor 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139389302
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139389302
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
139389302
Endosome - Golgi transport
Arf GTPase associated proteins
139389302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIT1_C
GIT_CC
ArfGap
GIT_SHD
Ank_2
Ank
Ank_4
Ank_5
Ank_3
Shugoshin_N
TTRAP
Sen15
Motif
Other DBs
NCBI-GeneID:
139389302
NCBI-ProteinID:
XP_070992018
LinkDB
All DBs
Position
30:complement(7922677..7959021)
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AA seq
772 aa
AA seq
DB search
MSKRLRNSEVCADCSVPEPRWASVNRGVLICDECCGVHRSLGRHSSQVRHLTHTPWAPTQ
LQMVQTLYNNGANSIWEHCLLDPMMSGKRKANPQDKVHPNKTEFIKAKYQMLAFVHRMPC
RDDDSFTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFDPEKGNTPLHVAAKAGQVSQ
AELLTVYGADPGAPDSNAKTPINYARQAGYHDLADRLVEIQYELTDRLAFYLCGRKPNHK
NGQHFIVPQMADSSLDLSELAKAAKKKLQSLSNHLFEELAMDVFDEVDRRETDAVWLATQ
NHSTLVTETTVVPFLPVNPEYSSTRNQGRQKLARFNAHEFATLVIDILSDSKRRQLGNSM
ISPKENVELILKSRSGGEGLDNDQPDYDSVASDEDTDKEPPSGKDRTKSLDSDLSDGPVT
VQEFLEVKNALSASEAKIQQLMKVNSNLSDELRLMQKKLHSLQSENTSLRRQGPTTHIYQ
VPISSGSEYTDPSSSSPSAMKRRQSARASRPMSMSIYETGSGLKPYLPKGDTPYLEEGAP
TLQPFFPPHASKLDKQSSMPDSDYDNTTNDYEMKDSGRRGRLRSSGWLGEGSSIPELDDL
GAEPDPALPSTEDVIRKTEQITKNIQELLRAAQENKHDRPCEGVRRLRHSLGCFSTLVPW
AEKAPSPVQPLSKCSPDPASRFIPCSERIYVAVTEMAALFPKRPHSEMVRGPLRLLTSSS
FRLQGECRKAAPPEEGPGPDMQLVTQQVIQCAYDIAKAAKQLVTITTKENSN
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaacgattaaggaatagtgaggtttgcgcggattgcagtgtcccagagcctcgc
tgggcctctgtgaacaggggcgtgctgatctgcgacgagtgctgtggtgttcatcggagt
ctgggcagacacagctcccaagtgcgtcacctgactcacacaccatgggctcctacacag
ctacaaatggttcagacgttatacaacaacggtgcaaattcgatatgggagcactgtcta
ctggacccgatgatgagtggtaaacgcaaggccaaccctcaggacaaagtgcacccaaac
aagacagagttcataaaggccaaataccaaatgctggcttttgtccaccggatgccttgt
cgagatgacgacagcttcacagccaaggacttaagcaagcaacttcactccagcgtccgc
actggtaacttggagacgtgcctgaggttactctctcttggagcccaggccaatttcttt
gacccagaaaaagggaatacgccgctgcatgtggctgccaaggcagggcaggtgtctcag
gcagagctgctgaccgtctacggggctgaccccggcgcccccgactccaacgccaagacc
cccatcaactatgcaaggcaagctggctaccatgacctggctgataggctggtagagatc
cagtatgaacttactgacagactggctttctatctctgtggaagaaagcctaatcataaa
aatggccaacacttcatcgtcccacagatggctgacagcagtttagatttatcagaactg
gcaaaggcggcaaagaagaaactccagtctctcagtaatcatttatttgaggagctggcg
atggacgtgtttgacgaagtggaccgaagggagaccgatgctgtatggctggcgacacag
aaccacagcaccctggtgacagagaccacagtggtgcctttccttcctgtgaacccagag
tactcatcaacacgaaaccagggacggcaaaagcttgcgagatttaacgcacatgaattt
gcaactcttgtcatcgacatattaagtgactcgaaacgtcgacagctggggaactctatg
ataagtcccaaagaaaacgttgaacttatcctaaaaagccggagtggtggcgagggtctg
gacaacgaccaaccggactacgacagcgtggcctctgacgaggacacggataaggagcca
ccctcgggcaaggaccggaccaagagtctggactcagacctgtcagacgggcctgtcacg
gtgcaggagttcctggaggtgaagaacgccctgtcggcctcggaggccaagatccagcag
ctgatgaaggtcaacagcaacctgagcgacgagctgcggctgatgcagaaaaagctgcat
tctctgcaaagcgagaacacgtctctcaggcggcagggcccaaccacccatatctatcag
gtccccatcagcagcgggtcagagtacactgacccttcttcctccagtccctcggccatg
aagcgccggcagtcggcgcgggccagccggcccatgtccatgtctatttatgagactggc
tcaggtctgaagccctacctccctaagggggacaccccctacctagaggagggtgccccc
accctgcaacccttcttcccacctcatgcctccaagctggacaagcagagcagcatgcca
gacagtgactatgacaacacaaccaatgactatgagatgaaggactctggtagacgtggg
aggttgaggagcagtggctggctgggggagggcagctccatccctgagctggatgacctg
ggggcagaaccggacccagcgctccccagcactgaggatgtcatccgtaagacggagcag
atcaccaagaacatccaggagctgctccgtgccgcgcaggagaacaagcacgacagacct
tgtgagggtgtgcgccggctcaggcacagtctgggctgtttcagcaccctggtgccctgg
gctgagaaggccccctctcccgtgcagcccctcagcaagtgctccccagatcctgcctcc
cgctttataccctgctccgaaagaatatatgtggccgtaaccgagatggctgctctcttt
cccaagagaccccattcagagatggtgagaggccccttgcgcctgttgacgtctagctcc
tttcggctccagggtgagtgtcggaaggcagcgccccctgaggaaggcccagggcccgac
atgcagctggtcacccagcaggttatccagtgtgcctatgacattgccaaagctgccaag
cagcttgtcaccatcaccaccaaggagaacagcaactga
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