Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139389361
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Entry
139389361 CDS
T10872
Name
(RefSeq) rho-related BTB domain-containing protein 1-like isoform X1
KO
K07868
Rho-related BTB domain-containing protein 1/2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
139389361
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139389361
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
ocla04031
]
139389361
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
139389361
GTP-binding proteins [BR:
ocla04031
]
Small (monomeric) G-proteins
Rho Family
RhoBTB
139389361
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
Ras
Roc
FAM186A-B_N
Motif
Other DBs
NCBI-GeneID:
139389361
NCBI-ProteinID:
XP_070992163
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All DBs
Position
30:complement(2715542..2809444)
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AA seq
728 aa
AA seq
DB search
MWVNTGTVGRALSMDIDTDYERPNVETIKCVVVGDNAVGKTRLICARACNATLTQYQLLA
THVPTVWAIDQYRVCQEVLERSRDVVDEVSVSLRLWDTFGDHHKDRRFAYGRSDVVVLCF
SLANPNSLRHVRTMWYPEIKHFCPRTPIILVGCQLDLRYADLEAVNRARRPLAKPIKPTD
ILPPERGHEVAKELGIPYFETSIVAQFGVKDVFDNAIRSALISRRHLQFWKSHLKRVQRP
LLQAPFLPPRPPRPVVGIPDPPPIDGEAPDSLFCQSLCADVLFLLQGGATRVFAHKVYLA
TSCSKFYDLFTLDLLATESDWEGEERAESGEEDEQSRRGAKEQAGRTKSLDIDKEGEGGA
RGLKRPPMLQQGSLRTSKSDNALPARSQCPLGPLGAGRGLSGWGRGFLSVYLEHIADPET
GRLRLMTVVSMDGLIQEEPFQAVLQYLYTGSLDESRGGLMQVATIAELLEVFDLRMMVAN
VLNRESFMNQEITKAFHVRRANRIKECLSKGTFADVVFHLDDGYLPAHKPLLISSCDWMA
AMFRGSFMESYIEEVSIPDTSSSCMRAVLEFMYCGLLSPCPDLEPIELIVLSNRLCLPRL
VALTEQHAVNELLQWAMKGVDIDGQVLAYLELAQFHNAKQLSAWCLHHICTNYNSVCRKF
PKDMKVMSPENQRHFEKQRWPPVWFLKEEDRYLRSQKEREREEEILRKLRTKRGWCFSRH
PSSSPHVS
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtcaataccggaacagtcggaagggccctctccatggatatagacacagactat
gagcggcccaacgtggaaaccattaaatgtgttgtggtaggggacaacgcggtgggcaag
actaggctcatctgtgcccgcgcctgcaatgccaccctcacacagtaccagctgctcgcc
acccacgtgccaactgtctgggccattgaccagtaccgcgtgtgccaggaggtgttggag
agatcacgggatgttgttgatgaggtcagtgtgtccctgagactatgggacaccttcggt
gaccatcacaaagacagacgcttcgcgtacggcaggtctgacgtggtggtgctgtgtttc
tccctggccaaccccaactccctgcgccacgtccgcaccatgtggtaccctgagattaag
cacttctgcccccgcacccctatcatcctggtgggctgtcagctggacctgcgctatgcc
gacctggaggctgtcaaccgcgcccgcagacccctagccaaacccatcaagccaacagac
atcctacctccagagagaggccacgaggtggcaaaggagctgggcattccctactttgag
accagcatcgtggcccagtttggggtaaaggatgtgttcgacaatgctatccgttctgcc
cttatctcccgccgccacctccagttctggaagtcccacctgaagagagtccagcggccc
ctcctccaggcaccgttcctgcctccccgtccccctcgccctgtggttggcatccccgac
ccccctcccatcgatggagaggcccctgattccctcttctgccagtcgctgtgcgccgac
gtcctcttccttctccagggcggtgccacgcgcgtcttcgcacacaaagtctacctggcc
acatcctgctccaagttctatgacctcttcaccctggacctgctggctactgagtcagat
tgggagggagaggagcgagccgagagcggggaggaggacgagcagagcaggagaggggcc
aaagagcaggcggggcgcacgaagagcttggacatcgataaggagggggaggggggcgcc
aggggactcaaacggccacccatgctccagcagggctccctgaggacttccaaaagtgat
aacgccctccccgccaggagccagtgccctctggggcccctgggagctggccgtggcctc
tcgggatgggggaggggcttcctgagtgtgtacctggagcacatagctgaccctgagacg
gggcgacttcgcctcatgactgtggtctccatggacggcctcatacaggaagaacccttc
caggcggtgctgcagtacctgtacacaggcagtctggacgagagccgagggggcctgatg
caggtggccaccatcgccgagctgctggaggtgtttgacctgaggatgatggtggccaac
gtgctgaaccgtgaaagcttcatgaaccaggagatcaccaaggccttccatgtccgccga
gccaaccgcatcaaagagtgcctcagcaagggtaccttcgccgatgtggtgttccacctg
gacgatggatacctgccggcccacaagcccctgctcatctccagctgcgactggatggcg
gccatgttccggggatccttcatggagagctacatcgaggaggtgtccatccctgacacc
agtagctcctgtatgcgtgcagtgttggagttcatgtactgtgggctgctttcgccctgt
cctgacctggagcctattgagcttatcgtcctatccaaccggctgtgtctgccacgcctt
gttgccctcacagagcagcatgctgtgaatgagctgctccagtgggcgatgaagggagtg
gacatcgacggacaggtgctggcttacctggagttggctcagttccacaatgccaagcag
ctgtctgcctggtgtctccatcacatctgcaccaactacaacagcgtctgtcgcaagttc
cctaaagacatgaaggtcatgtctccagagaaccagaggcactttgagaagcagcggtgg
cctccggtgtggttcctgaaggaggaggaccgctacctgcgctctcagaaggagcgcgag
cgcgaggaggagatcctacgcaagctgcgcaccaagagaggctggtgcttctcgagacac
ccgtcctcctcgccccatgtctcctga
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