Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139389373
Help
Entry
139389373 CDS
T10872
Name
(RefSeq) 28S rRNA (cytosine-C(5))-methyltransferase-like
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ocla03009
]
139389373
Enzymes [BR:
ocla01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
139389373
Ribosome biogenesis [BR:
ocla03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
139389373
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
Methyltransf_31
PCMT
FtsJ
Motif
Other DBs
NCBI-GeneID:
139389373
NCBI-ProteinID:
XP_070992192
LinkDB
All DBs
Position
3:16384336..16392214
Genome browser
AA seq
749 aa
AA seq
DB search
MGRKLDPTTYVKKGPGRKSRKQKGAETELAKFLTDEDTAPKRLSSRSRKRAGKRAQVTKK
PKESIEKEEPKKGFTDENSEWLKPAKRKREVGQSDNEDDSDSQWEQEEDEGQEGGENNKG
KNILIEGDGDDDDDLVDDYGALEDSSEGEGEVDGDGEELLPIERAARKQKKLQEAMGQES
GDDDDDDNKGKSGDEDMDEDDTVQANLDDMDKFILPGAEEIAKEGVLLVDLQTIHQRIKD
NVDVLSHFATKREEGKERTEYLSLLKKDLSTYYSYNNFLIDKLLDIFPVSELIDFLEANE
IQRPVTIRTNTLKTRRRDLAQALINRGVNLDPLGKWSKVGLVIFDSSVPIGATPEYLAGH
YMLQGASSFLPVMALSPQEGETVLDMSSAPGGKTTYMAQLMRNTGVIVANDASADRLKSV
VGNIHRLGVTNSMICNYDGRQFPKVMGGFDRVLLDAPCSGTGVISKDPAVKTSKDESDIQ
RLAHLQKELILAAIDSVNAESPSGGYLVYCTCSIMVEENEWVVDYALKKRNVKLVQTGLD
FGKEGFTRFKERRFHPSLKLSRRFYPHSHNMDGFFVAKLKKFSNTVPTTAVDKDGEEETE
PSEAVEVTADSSDEDMPSKAGSKNKSKKQKPVPGTPTVSQKATANGKPAKSIGKKTTNPS
TLKKNEKPTGPKKAKIAKMDGGTVKVDGELKKSNTVKTEGETTKQSKEGSRFEKKGDKQR
KSPMQSKKRMGKNKFNKLKKLLKKEEVGQ
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgggcaggaagttggatcccaccacttatgtgaagaaggggccggggcggaagtccagg
aagcagaaaggagcagagactgagctggccaagttcttaacggatgaggatactgcacca
aaacgactgtcaagcaggtccaggaaaagagctgggaagcgagctcaagtgaccaaaaag
cccaaggaaagcattgagaaggaggagccaaaaaaaggattcacagatgaaaacagtgaa
tggctgaagccagcaaagaggaagcgtgaggtcggccaatcagataacgaggacgacagt
gacagccaatgggagcaggaagaggacgagggacaagagggaggggagaacaataaaggg
aaaaacattctaattgagggagatggtgatgatgacgatgacctggttgatgactacggt
gcattggaggacagcagtgaaggagagggggaagtagatggtgatggagaggagctgctc
cccatcgagcgagctgccaggaagcagaagaagctgcaggaagcaatgggccaggagagt
ggtgatgatgatgatgatgataataaggggaagagtggagatgaagacatggatgaagat
gacacggtacaggctaatttagatgatatggacaaattcatactacctggagcagaggag
atagcaaaagagggtgttttgcttgtagacctgcagaccatccaccagagaataaaggac
aacgtggatgttctctctcactttgcaaccaagagagaggaggggaaagagagaacagag
tacctctctctcctcaaaaaggatctttccacttactacagctacaacaatttcctcata
gacaaactgctggatatcttcccagtgtcagagctgattgatttcctggaggccaatgaa
attcagcgacctgtcaccattcggaccaatacactgaagacaaggaggagggacttggct
caggccctgatcaacagaggggtgaatctggatcctctggggaagtggtctaaagtgggc
ctggtcatcttcgactcctcggtacccatcggtgcgaccccagagtacctagctggtcac
tacatgctgcagggagcctccagcttcctgcctgtcatggctctctctccccaggagggg
gagactgtgctcgacatgagctcagctcctgggggaaagaccacctatatggcccagttg
atgaggaacacaggtgtgattgtggccaatgatgccagtgctgacagactgaagagtgtg
gtgggcaacatccaccgtctgggagtcaccaactcaatgatctgtaactacgacgggagg
cagttccctaaggtaatgggtgggtttgacagagtgctgcttgatgctccctgctcaggc
acaggagtaatctccaaagaccctgctgtgaagaccagtaaagacgagtctgacatccag
cggttggcccatctgcagaaggagctcatcctggcggccatcgactcggtcaacgctgag
tctccctctggaggctatctggtgtactgcacatgctctataatggtggaggagaacgag
tgggtagtggactatgctcttaagaaaagaaacgtcaaactcgtccagactggactggac
tttggcaaagaaggtttcaccagattcaaagagagacgattccatccctctctgaaactc
tcacgccggttctatcctcattcccacaacatggacggtttctttgtggccaagctgaaa
aagttctccaacacggtcccaaccacagcagttgacaaagacggagaagaggaaaccgag
ccatctgaggcagtagaggttacagctgattcctctgatgaggacatgccatctaaagca
gggtctaagaacaagtccaagaagcagaagccagtccctggcacgccaactgtgtcacag
aaggccacagccaacgggaagccagccaaaagcatcggcaagaaaacaacaaacccaagc
accttgaaaaagaatgagaaaccaactgggccgaaaaaggcaaagatcgctaagatggat
ggtgggactgtgaaagtggatggagagctcaagaagtccaacacagtcaaaacagaaggg
gaaacgaccaaacagtcaaaggaagggagcaggtttgagaaaaagggcgataaacagagg
aaatcccccatgcagagcaagaagagaatggggaagaacaaattcaataagttgaagaag
ctgctgaaaaaagaagaggttggacaatga
DBGET
integrated database retrieval system
