KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139389392
Entry
139389392         CDS       T10872                                 
Name
(RefSeq) proliferating cell nuclear antigen-like
  KO
K04802  proliferating cell nuclear antigen
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03030  DNA replication
ocla03410  Base excision repair
ocla03420  Nucleotide excision repair
ocla03430  Mismatch repair
ocla04110  Cell cycle
ocla04530  Tight junction
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    139389392
   03410 Base excision repair
    139389392
   03420 Nucleotide excision repair
    139389392
   03430 Mismatch repair
    139389392
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    139389392
  09144 Cellular community - eukaryotes
   04530 Tight junction
    139389392
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ocla03032]
    139389392
   03400 DNA repair and recombination proteins [BR:ocla03400]
    139389392
DNA replication proteins [BR:ocla03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    139389392
DNA repair and recombination proteins [BR:ocla03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     139389392
   MMR (mismatch excision repair)
    Other MMR factors
     139389392
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    139389392
SSDB
Motif
Pfam: PCNA_C PCNA_N Rad1 Rad9 Hus1
Other DBs
NCBI-GeneID: 139389392
NCBI-ProteinID: XP_070992214
LinkDB
Position
30:complement(24241146..24246462)
AA seq 260 aa
MFEARLVQGSILKKVLEALKDLITEACWDVSSSGISLQSMDSSHVSLVQLTLRSDGFDSY
RCDRNLAMGVNLSSMSKILKCAGNEDIITLRAEDNADTLALVFETLNQEKVSDYEMKLMD
LDVEQLGIPEQEYSCVVKMPSGEFARICRDLSQIGDAVMISCAKDGVKFSATGELGTGNV
KLSQTSNVDKEEEAVSIEMNEPVQLIFALNYLNFFTKATPLSKTVILSMSADIPLVVEYK
IADMGHVKYYLAPKIDEEAS
NT seq 783 nt   +upstreamnt  +downstreamnt
atgtttgaggctcgcttggtacagggatccatcctgaagaaggttttggaggctctgaag
gacctgatcacggaggcctgttgggacgtgagttcgtcgggtatctctcttcagagtatg
gactcgtcccacgtctccctagttcagctcactctccgcagcgacggattcgactcctac
cgttgtgaccgcaacctcgcaatgggagtcaatcttagcagtatgtcaaagatcctgaag
tgtgctgggaatgaggacatcatcactctcagagcagaggacaacgcagacacactcgcc
ctagtcttcgagacactcaaccaggagaaggtgtcggactatgagatgaagttgatggat
ctcgatgtagaacagttgggaatcccagagcaggagtacagctgtgtggtcaagatgcca
tcgggggagtttgcccgtatctgccgtgacctgtctcagattggtgacgccgtcatgatc
tcttgcgccaaggatggcgttaagttctcggccacgggagagctgggcactggcaacgtc
aaactgtcccaaaccagcaacgtggacaaggaggaggaagcggtgagtattgagatgaac
gagccagtccagctgatctttgctctcaactacctcaacttcttcaccaaggccacaccc
ctctccaagacagtcatcctcagcatgtctgcagacatccccctagtggtggagtacaag
atagctgacatgggccatgtcaagtactacctggcgcccaagattgacgaggaggcttcc
taa

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