Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139389455
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Entry
139389455 CDS
T10872
Name
(RefSeq) DNA excision repair protein ERCC-8 isoform X1
KO
K10570
DNA excision repair protein ERCC-8
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03420
Nucleotide excision repair
ocla04120
Ubiquitin mediated proteolysis
Brite
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
139389455
DNA repair and recombination proteins [BR:
ocla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
139389455
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NCBI-GeneID:
139389455
NCBI-ProteinID:
XP_070992324
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Position
30:30666961..30684980
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AA seq
412 aa
AA seq
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MLGFLTARQAGLDDPLRLRRAESTRRVLNLELNHDRDVDRIHSNGVNTIDIEVIEGRYML
SGGADGVIVVYDLENNSRKPQYTCKAVCTVGRSSRYVHRFSVETVQWYPHDTGMFVSSSF
DKTMKVWDTETLKPAEVFQFEGNVYCHHMSPIARKHSLIAVGTKDQKVQLCDLKSGSRIQ
VLQGHRGEVLSVRWSPRYEHILATASTDSRVLVWDVRRASGSLFSLDQHNGDKSKASSEA
VNTAHNGRVNGLCFTVDGLYLLTTGTDDRMRLWNSANGKNTLVNYGKVSNESRKGLKITV
SRSCSPEFVFVPCGSSVAVYTLHTGELVTMLRGHYNNVDCCQFHPDYQRRTRSVSCSGGV
FEELYSGGKDCNILAWVPVVRPPDVEEGTAVKGGSQATVNPAFEDAWSSDED
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgttgggttttctaacagcaagacaggctggacttgacgacccacttcgtctgagacgg
gcagagtcaacacggagggtcctcaatttagagctgaatcatgacagagatgtggatcga
atccatagcaatggcgtaaacaccatagacattgaagtcattgagggcagatacatgcta
tctggaggggcagatggggtgattgtggtgtatgacctggagaacaacagcaggaaaccc
caatacacctgtaaagcagtctgcactgtaggcaggtccagtcggtatgtccacaggttc
agtgtagagacagtgcagtggtacccacacgacacaggcatgtttgtctccagctcattt
gacaaaaccatgaaggtctgggacactgagacactaaagcccgctgaagtgttccagttt
gaaggaaacgtctactgtcaccacatgtcccccattgccaggaaacacagcctcatcgca
gtgggtaccaaagaccagaaagtacagctctgtgacctgaagtctggctcacgcatccag
gttttgcagggtcacagaggtgaggtcctatctgttcgatggtcgccaagatatgagcac
attttagctacagccagtactgacagcagggtgttggtgtgggatgtgcgtcgggcctca
gggagcctgttctctctggatcaacacaacggggacaagtccaaggcctcgtcagaggca
gtgaacacagcccataatggaagggtaaatggcctctgcttcacggtcgacggcctctac
cttctcaccacgggaacagacgaccgcatgaggctgtggaacagtgccaatggaaaaaac
acactggtgaattatgggaaggtgagtaacgaaagccgtaaagggttaaagatcacagtg
tctcgtagctgcagcccggagtttgtgtttgtaccttgtggcagctcagtggcggtgtac
actctacacaccggggaactcgtaaccatgctgaggggacactacaacaacgtggactgc
tgccagttccaccccgactaccagcgcaggacgagatctgtgagttgcagtgggggtgta
tttgaggagctgtacagcgggggtaaagactgtaacatcctagcctgggttcctgttgta
cgaccaccagacgtggaggaagggaccgccgtcaagggtgggagccaggctacggtgaat
cctgcttttgaagacgcatggagcagtgatgaggactga
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