Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139389462
Help
Entry
139389462 CDS
T10872
Name
(RefSeq) nuclear receptor ROR-beta-like isoform X1
KO
K08533
RAR-related orphan receptor beta
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139389462
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ocla03310
]
139389462
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
139389462
Nuclear receptors [BR:
ocla03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
139389462
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
139389462
NCBI-ProteinID:
XP_070992336
LinkDB
All DBs
Position
30:complement(8987822..9019497)
Genome browser
AA seq
482 aa
AA seq
DB search
MHVSPRKMKTDAIAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAAYSCPRQ
RNCLIDRTNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRILNERQ
QQTGEAEALARVYSSSLTNGLNTLNHEIGGTYANGHVIELPKGQVNGGAPGGYYHGMDST
QPSPDQSGLDMAGMKHIKQEPVYDLTPVTNLFNYSSYQDSQLAPSNVSMGELDRIAQNII
KSHLETCQYTADELQQLAWQTHSYDDIKMYQSKTRDMLWQQCAIQITHAIQYVVEFAKRI
SGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGCDDLVS
AVFDFAKSLCSLQLTEEEIALFSAAVLISTDRPWLMEPRKVQKLQEKIYFALQHIMQKNH
MDEDTLAKLIGRIPTLSALCTLHTEELQAFQQLHPETVNVLFPPLYKELFNPDPNAAITI
PK
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtgtctccgcggaaaatgaaaacggatgccatagcccaaatcgaagttatacca
tgcaaaatttgcggagacaagtcatcaggaatccactatggagtcatcacatgtgagggc
tgcaaagggttcttcagacgtagtcagcagaacaacgccgcctactcctgccctcgccag
aggaactgtctgatcgacaggaccaaccgaaaccgctgccaacactgccgcttacagaag
tgtctcgcactcggaatgtccagagatgcggtgaagtttggccgcatgtcaaagaagcag
cgagacagcctgtacgccgaggtgcagaagcaccagcagcggatcctgaatgagcggcag
cagcagactggtgaggccgaggccctggcgcgcgtctactcctccagcctgaccaacggc
ctcaacaccctcaaccacgagatcggaggcacctacgccaacggccacgttatcgagctt
cccaagggccaggtgaacggtggtgcccctggcggctactaccacggtatggactccacc
cagccctccccggatcagtcaggccttgacatggcgggcatgaagcacataaaacaggag
cctgtgtacgacctgacccctgtgaccaacctgttcaactacagctcctaccaggacagt
cagctggcgccaagcaatgtcagcatgggagagctagatcgtatcgcccagaacattata
aagtctcacctggagacctgtcaatacacagcagatgagctccagcagctggcctggcaa
acacactcctacgatgacatcaagatgtaccagagcaaaacgcgagacatgctgtggcag
cagtgtgccatccagatcacccatgcaatccagtatgtggtggagtttgccaagcgcatt
tcaggcttcatggagctgtgccagaatgaccagatccttctgctcaagtcaggttgtctg
gaggtggtcctggttagaatgtgtcgggcgtttaacccgctcaacaacacagtgctgttt
gaggggaagtacggtggcatgcagatgttcaaagctctaggctgtgacgatctggtcagc
gcggtgtttgactttgccaagagtctgtgctctctgcagctcactgaggaggaaatcgct
ctgttctccgcagcagtgctcatctccacagaccggccgtggctgatggagcccaggaag
gtgcagaagctccaggagaagatctactttgcgctgcagcacatcatgcagaagaaccac
atggatgaggacacgctggctaagctgattggtcggatccccacgctgtcggccctgtgt
actctccacaccgaggagctacaggccttccagcagcttcatcccgagacggtcaatgtg
ctcttccccccactctacaaggagctcttcaatcccgaccccaatgcagccatcaccata
cccaagtga
DBGET
integrated database retrieval system
