Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139389475
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Entry
139389475 CDS
T10872
Name
(RefSeq) transducin-like enhancer protein 1 isoform X1
KO
K04497
groucho
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04310
Wnt signaling pathway
ocla04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
139389475
04330 Notch signaling pathway
139389475
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139389475
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
ADF / Cofilin
SCMC complex
139389475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TLE_N
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_CAF1B_HIR1
Beta-prop_Nup120_160
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_NUP159_NUP214
Beta-prop_IP5PC_F
WD40_RFWD3
HALZ
Motif
Other DBs
NCBI-GeneID:
139389475
NCBI-ProteinID:
XP_070992363
LinkDB
All DBs
Position
30:complement(574546..617311)
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AA seq
777 aa
AA seq
DB search
MYPQGRHPTPHQAPGQPFKFTIPESLDRIKEEFQFLQAQYHSLKLECEKLASEKTEMQRH
YVMYYEMSYGLNIEMHKQTEIAKRLNTICAQVIPFLSQEHQQQVIQAVERAKQVTMGELN
SVIGVRVLPGLPPTHQHLSHAHGPHVPLTPHPAGLNPAHLGGGASLLALSSALGAPPHHL
VGKEDKKHTAEAEQLREQEPGTSNTLLVADSLRNSDKRRNGPEFPNDTKKRKVEDKDSSH
YDSDGEKSDDNLVVDVSNEDPASPHGTPLPSPRENGLDKTRLLKKDPSCSPASTASSASS
SSLKSKEMGMRDKPGTPQPKLSTPTHRGDSTPGPSATPTLRPSLSKPPSMELPHPPTLVY
SLAAGLRTPLAVSGPYPGPFGMLPHAAMNGELASAGAGYAGLHNMSPQMSAAAAAAVAAY
GRSPMAGFDPLPHMRVPGMPPSLSGIPGGKPAYSFHVSADGQMQPVPFPPDALVGPGIPR
HARQINTLNHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYI
RSCRLLPDGRTLIVGGEASTLSIWDLATPTPRIKAELTSSAPACYALAISPDSKVCFSCC
SDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQ
HDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVTKPDKYQLHLHESCVLSLQFASCGKWF
VSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEVIY
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgtatccccagggtcgacacccgacaccccaccaggccccaggccaacctttcaaattc
accatcccagagtcactggaccgcatcaaagaggagttccagtttctccaagctcagtac
cacagtttgaaattggagtgtgagaagctggccagtgagaagacagagatgcagaggcac
tatgttatgtactatgaaatgtcttacgggctgaacattgaaatgcacaaacagaccgag
attgccaagaggctcaataccatctgtgcacaagtcatccccttcctctcacaggagcac
caacagcaggtgatccaggcagtggagagggccaagcaggtcaccatgggcgaactgaat
tctgtcatcggggtacgtgtccttcccggtctaccacccacacatcagcatctgtcccac
gcgcacggcccccatgtccccctcaccccccacccggctgggctcaacccagcccacttg
gggggaggggccagcctgctcgccctgtccagtgccctgggggcgccaccgcaccacctg
gtgggcaaagaggacaagaaacacacggcggaggccgagcagctaagagagcaagagccg
ggcacaagtaataccctgctggttgctgacagtttgaggaactcagacaagcgacgcaac
ggacctgaattccccaacgacaccaagaagaggaaagtagaggacaaggactctagtcat
tatgatagtgatggagagaagagtgatgacaacctggtggtggatgtctccaatgaggat
cctgcctcccctcatggtacgcccctgccctcccccagagagaacgggctggacaagaca
cgcctcctgaagaaggacccatcctgtagccccgcctccacagcctcctctgcaagctcc
tcctccctcaagtccaaagagatgggaatgcgtgacaagccaggtacgcctcaaccgaag
ttgagcactcccactcaccgaggagactccacacccggacccagtgccacacccactctc
cgccccagcctatccaagcccccctccatggagctacctcacccacctactcttgtctac
tccctagccgctggtctgcggactccgctggcggtgtcagggccgtaccccgggccgttt
ggcatgctgcctcacgccgccatgaatggggagctggcaagtgccggcgcaggctacgcc
ggcctccacaacatgtcccctcagatgagcgctgcggcggccgccgctgtggctgcctac
ggacgctcccctatggccggctttgaccctcttcctcacatgagagtccctggaatgccc
ccaagcttatcaggcatccctggaggcaaaccagcctactccttccatgttagcgccgat
ggacagatgcagccggtaccgttccctccagatgccctggtgggccctggcatcccgcgc
catgcacgccagatcaacacactgaaccatggtgaggtggtctgtgctgtcaccatcagc
aaccccacgcgccatgtctacacaggcggcaagggctgcgtcaaggtctgggacatcagt
caccctggcaacaagagtcctgtgtcccaactggactgcctgaaccgagacaactatatc
cgctcgtgccggctgctccccgacggccggacgctcatcgtggggggcgaggccagcaca
ctgtcaatctgggacctagccacgcccactccacgcattaaggcggagctgacctcctca
gccccggcctgctatgccctggccatctcccctgactccaaggtgtgcttctcctgctgc
agcgatgggaacatcgccgtctgggacctgcacaaccagaccctggtcagacagttccag
ggccacacagacggagccagctgtattgacatctccaacgatgggacaaagctgtggacg
ggggggctggacaacaccgtacgctcctgggacctaagagagggacgccagctgcagcag
cacgacttcacctcacagatcttttctctggggtactgtccgacgggagagtggctggcg
gtggggatggagagtagtaatgtggaggtgctccacgtcaccaagccagacaagtaccag
ctccacctccacgagagctgtgtgctttccctccagtttgcttcctgtggaaaatggttt
gtgagcacagggaaggataacctgctgaatgcgtggaggacaccgtacggagccagtata
ttccagtcgaaagagtcttcgtcagtgctaagctgtgacatctcagtggatgataagtac
atagttacaggttctggagataagaaggcaactgtctatgaagtcatctactag
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