Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139389551
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Entry
139389551 CDS
T10872
Name
(RefSeq) C-X-C motif chemokine 11-like
KO
K12672
C-X-C motif chemokine 11
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04060
Cytokine-cytokine receptor interaction
ocla04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
139389551
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
139389551
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ocla04052
]
139389551
Cytokines and neuropeptides [BR:
ocla04052
]
Cytokines
Chemokines
139389551
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Ortholog
Paralog
GFIT
Motif
Pfam:
IL8
Rh5
Motif
Other DBs
NCBI-GeneID:
139389551
NCBI-ProteinID:
XP_070992469
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All DBs
Position
30:39839735..39844529
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AA seq
181 aa
AA seq
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MTNTMTSKVLISFLACLLLANVEGQVGHSKARCLCLNGLVNHIKPLHIEMLEVYTSSHSC
RNMEIIVTLKNGEGKKCLNPEAPFAKKTIEKIMNKQRWHTSTIDVKIWKVECRGTTSVYW
EYRRDYTTAVAKKRASFGAVKRQLRPCPGVKFDLIYPAVLTLPDGSTYRFEDLASAADSI
N
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacacgatgacatcaaaggtcctcatcagcttcctggcctgtctgctcctggcc
aatgttgaaggccaggtgggtcattctaaagctcggtgcctgtgtctgaatggactggtg
aaccacattaaacctcttcacattgagatgcttgaggtgtacacctccagccactcctgc
aggaacatggagatcattgtcactctgaaaaacggagaagggaaaaagtgtctgaatcca
gaggctccatttgccaagaaaaccattgagaaaataatgaacaaacaaaggtggcatacc
tcgacaatagatgtgaagatatggaaagtagaatgcagaggaacaacatccgtctactgg
gaataccggagggactacaccacagctgtggctaagaagcgggctagttttggagctgtg
aagcgccagctacgcccatgccctggagtgaagttcgacctcatctaccctgcggttctg
actttaccggacggctccacgtacagattcgaggacctggcttcagcggcagattccatc
aactag
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