Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139389554
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Entry
139389554 CDS
T10872
Name
(RefSeq) AP-3 complex subunit beta-2-like
KO
K12397
AP-3 complex subunit beta
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
139389554
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139389554
Membrane trafficking [BR:
ocla04131
]
Endosome - Lysosome transport
Others
AP-3 complex
139389554
Endosome - Golgi transport
139389554
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
CEBP1_N
Cnd1
HEAT_2
INTS1_R4
PDS5
Hex_IIIa
Motif
Other DBs
NCBI-GeneID:
139389554
NCBI-ProteinID:
XP_070992471
LinkDB
All DBs
Position
30:complement(40747230..40771542)
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AA seq
622 aa
AA seq
DB search
MNGAIDKNRHKHKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRGLKDPNQLIRASALR
VLSSIRVTIIVPIMMLAIKEAASDMSPYVRKTAAHAIPKLYSLDPEQKDCLIEVIEKLLA
DKTTLVAGSVVMAFEELCPERIDLIHKNYRKLCNLLIDVEEWGQVVIINMLTRYARTQFL
NPNMNVSTAGPRILCLRGCEALTTATSHCVCVCVGGERQLHVINYINVLSRSLPPPFLSP
CSEVQYVVLQNVATMSIKRRGMFEPYLKSFYIRFTDPTQIKVLKLEVLTNLANKTNISTI
LREFQTCIKSNDKDFVAATIQAIGRCATNIGEVRDTCLNGLVQLLSNRDEVKPSVPKDLF
ALTKLLTQYVLNLAKYDQNYDIRDRARFIRQLIVPTDKSGALSKYAKKLFLALKPAPVLE
SPFKEWCPQQKEDPRLHVHWHTGSQALPTCSNGAIFRRINNMLGNSLDLTGVCTTPTNHK
GKRVHHLSDGDFAAMGSPIGSKVPCPSRAQPTLRGGGLSDFTQLWQSLSLAYWEQPSATM
EPPSHTNSPSMLGMLGSPLGQALEPLGTTDLLAMVPGLSQGGNPRVEGRSFLDSRCSIPA
DSETSGFSSRSDHLSELLVSFD
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggccatagacaagaacaggcacaaacacaagaacatcgaggtgaagaagctg
gtctatgtgtacctggtgcgctatgctgaggaacagcaggatctggctctgctctccatt
tcaacctttcagagaggcctgaaggaccctaaccagttgatccgggcaagtgctctgcgt
gtgctctccagcatcagagtcaccattattgtccctatcatgatgctggccatcaaagag
gctgcctccgacatgtccccctatgtgaggaagacggcagctcacgccatccccaaactc
tacagcttggacccagagcagaaggactgtctgattgaggtcattgagaagctcctggct
gataaaaccacactagtggcaggtagtgttgtcatggcctttgaggagttgtgtcctgag
cgcatagacctgatccataagaactaccgtaagctgtgtaacctgctgatcgacgtggag
gagtggggtcaggtggtcatcatcaacatgctcactcgctacgcccggacgcagttcctc
aaccccaacatgaacgtgagtacagcaggtccccgcatactgtgtcttcgtggttgtgag
gccttgacaacagctacatctcattgtgtgtgtgtgtgtgtggggggggagaggcagctg
catgtaattaattatattaatgttctctctcgctcccttccccccccctttctatcccca
tgtagtgaagtgcaatatgtcgtccttcagaatgtggcaacaatgtccatcaagagaagg
gggatgtttgagccctatctgaagagtttctacatccgcttcacagacccaacccagatt
aaagtcctcaagctggaggttttgaccaatttggccaacaagacaaatatatccaccatc
ctgagagaatttcagacgtgcattaaaagcaatgataaggactttgtggcagccaccatc
caggccatcggccgctgtgccaccaacattggggaggtgagggacacctgtctcaacggc
ctggtgcagctgctctccaaccgcgatgaggtgaaaccgtccgtacccaaggatttgttt
gctttgacaaaactgctcactcagtacgtgctgaacctggccaagtacgaccagaactat
gacattcgcgaccgggcacgcttcatccgccagctcatcgtgcccactgacaagagtggt
gccctcagcaagtatgccaagaagctgttcctggcccttaagcctgcgcccgtcctcgaa
tctccatttaaagagtggtgccctcagcaaaaagaagacccgaggctccatgtccactgg
catacaggctctcaagccctgcctacatgcagcaatggtgctatcttccgccgaattaac
aatatgttgggcaactctctggacctcactggggtgtgcactacacccacaaaccacaag
gggaagcgtgtccatcacctgtcagatggggattttgcagcgatgggtagccctataggc
agcaaggttccttgcccctccagagcccagcctacgctccgtggtggtggcctgtctgat
ttcactcagctgtggcagtcactcagcctagcctactgggagcagccctctgctaccatg
gagcctccgtcacacaccaactcgccctccatgctaggcatgctgggtagcccactgggc
caggctctggaacctctgggcaccacagatctgctggcgatggtccctgggctgagtcag
ggtggaaatccccgcgtggaggggcgctccttcctggactcgcgctgcagcatcccggcc
gactctgaaaccagcggctttagctccagatcggaccacctctctgagctgctggtgagt
tttgattga
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