KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139389577
Entry
139389577         CDS       T10872                                 
Name
(RefSeq) survival motor neuron protein 1-like
  KO
K13129  survival motor neuron protein
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ocla03041]
    139389577
Spliceosome [BR:ocla03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   SMN complex factors
    139389577
SSDB
Motif
Pfam: SMN_YG-box SMN_Tudor SMN_G2-BD TUDOR BAHCC1-like_Tudor
Other DBs
NCBI-GeneID: 139389577
NCBI-ProteinID: XP_070992498
LinkDB
Position
30:complement(2616721..2621967)
AA seq 278 aa
MANGCKDMLFARGAGQSDDSDIWDDTALIKAYDKAVASFKTALKGEEDTTIPKKDNPGKK
RKNHKKNRSRKRSSAPSDKEWRVGEPCCAYWSEDGKLYAATISSIDEKRGTCIVVFTDYG
NEEELNLRDLLTESSEVEEEAPDKVKEAESSTKESDRSSAPHSHVPRSKPKSKSPKVPPM
WGPGFPGFPPGPPPMPGFRMGDSRRPGASGPAPPGWPPMMPSGPPMIPPPPPMSPDGEDD
EALGSMLIAWYMSGYHTGYYLGLKQGRKEAAGKKAHHK
NT seq 837 nt   +upstreamnt  +downstreamnt
atggcaaatgggtgtaaagatatgctttttgctcgtggagctggacaaagtgacgattct
gacatttgggatgacactgcactgataaaggcctacgacaaagcagttgcatcattcaag
accgccctgaagggggaggaggacaccacaatcccaaagaaagacaaccccggaaagaaa
cggaaaaaccacaaaaagaaccgcagcagaaagagaagtagtgctccttccgataaagag
tggagagtcggcgagccctgctgtgcctactggtctgaagacggcaagctttacgctgcc
actatctcctccatagacgagaagcggggcacctgtatagttgtgttcacagactatggg
aacgaggaggagctgaacctccgagaccttctgaccgagagctccgaggtagaggaggaa
gcccccgacaaggttaaagaagcagagtcttctacaaaggagagcgatcggtcgtccgcc
cctcacagtcacgtgccacgctctaaacccaagtccaaatcccccaaagtacctccgatg
tggggtccaggtttccctggctttcccccaggtccccctcccatgcctggcttcagaatg
ggagactctaggcgacctggggcctccgggcctgcccctccgggatggcctcccatgatg
ccctctgggccaccgatgatccctccccctccccccatgagtccagacggagaggacgat
gaggccttgggaagtatgctgatcgcctggtacatgagtggataccacaccggatactac
ctggggttaaagcaaggccgcaaagaagctgctggaaagaaggctcaccacaagtga

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