Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139389625
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Entry
139389625 CDS
T10872
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1-like
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
ocla01100
Metabolic pathways
Module
ocla_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
139389625
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ocla01003
]
139389625
Enzymes [BR:
ocla01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
139389625
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
139389625
Glycosyltransferases [BR:
ocla01003
]
Glycan extension
O-Glycan
139389625
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
TOBE_3
Motif
Other DBs
NCBI-GeneID:
139389625
NCBI-ProteinID:
XP_070992583
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Position
30:31177334..31184894
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AA seq
542 aa
AA seq
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MCSESTMLRRWLLALVARVGVIALMVCCCLSLLYLLACKPQSSYSHEQAQVWAGGATSKE
GYLALLQESEDTHRHYINSLSKQIAQLKEALQMRTQQLQESLEKARAKGVLPMGLEGLHR
PQTHTDLQEFFKAQLSRAEVQSGEKLPSEYAVIPYESFTLHRVYQLEMGLTRHPEERPVR
KDRRDELTGTLEIALQVLNGPRRHGERRRRSYSPSDFIEGLTRTERDKGTVYELMFKGER
PQDFRQLVFFRPFGPVVRVKNERVDTRHMLINIIVPLSRRADTFRQFINNFRKVCIQQEG
KTHLTVVYFGRDQIDEVKAIMDQTSRETQFRNFTLIQLNEEFSRGRGLEVGARAWRRSHN
VLLFFCDVDIHFTLDFLTSCRLNAEPGKKVFYPVLFSQYNPSLIDNNQSPFPSIQQQLVI
MKDAGFWRDFGFGMTCQYRSDFINIGGFDRNTKGWGLEDVHLYRKYLHSKLMVIRSPSRS
LFHLWHEKQCADELQPDKYKMCMQTKAMSEASHGHLGELFFTQEIQEHMERQKLLNDSSH
LR
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgtgctctgaatccacaatgctccggaggtggctgttagctctggtggcccgtgttggg
gtcatagcactaatggtgtgctgctgcctgtctctactctacctgctggcctgcaaaccc
cagagcagctacagccatgaacaggcccaggtctgggctggaggagccaccagtaaagag
ggttacctggcgctactgcaggagagcgaggacacacacaggcactatattaacagtctc
agtaagcagatagctcagctcaaagaggctcttcagatgaggacccagcagctacaggag
tctctggaaaaggccagggccaaaggggttctacctatggggctggagggcctgcatagg
ccccagacacacaccgacctccaggagttcttcaaggcccaattgagccgggctgaggtc
cagtctggtgagaagttgcccagtgagtacgccgtgattccctacgaaagcttcaccctg
cacagggtgtaccagctcgagatggggctgacccgtcatccagaggagaggcctgtgagg
aaggaccggagagacgagctgacaggcacgctagagatagccctgcaggtcctcaacgga
ccccggagacacggggagcgccgccgacgctcctattcaccatcggacttcatagagggg
ctgactcgtacagagcgtgacaaggggacagtgtatgagctgatgtttaagggcgagagg
ccgcaggacttcagacagctggtgttcttcagacccttcggaccggtggtcagggtgaag
aatgagagggtggacacacgccacatgctcatcaacatcatagtaccactgtccaggagg
gctgacacattcagacagttcatcaacaacttcagaaaggtgtgcatccagcaggaaggg
aagacccacctcactgtggtctactttggcagggaccagattgacgaggtcaaagccatc
atggatcagacatccagggaaacccagttccgaaacttcacgctgatccaactgaatgag
gaattctctcgtgggcggggcttagaggtgggcgcacgggcctggaggcggagccacaac
gtgctcctcttcttttgcgatgtcgacatccactttaccctagacttcctcacatcctgc
agactcaatgcagagcctggtaagaaagtgttttacccagttcttttcagtcagtacaat
ccatctcttatcgacaataaccagagtcccttcccttctattcaacaacaactggtgata
atgaaggatgctggattctggagagattttgggtttggcatgacttgccagtataggtct
gatttcatcaacataggtgggtttgaccggaacaccaaaggctggggtttggaggatgtt
cacctatacagaaagtacctgcacagcaagctgatggtgattcgatctccatctcgtagc
ctcttccacttgtggcatgagaagcaatgcgcggacgagctgcagccagacaagtataag
atgtgtatgcagaccaaggccatgagcgaggcctctcacggccacctgggggagctgttc
ttcacacaggagatccaggagcacatggagaggcagaaactactgaacgactcaagtcac
ttgaggtag
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