Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139389686
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Entry
139389686 CDS
T10872
Name
(RefSeq) sarcoplasmic/endoplasmic reticulum calcium ATPase 2-like isoform X1
KO
K05853
P-type Ca2+ transporter type 2A [EC:
7.2.2.10
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04020
Calcium signaling pathway
ocla04148
Efferocytosis
ocla04260
Cardiac muscle contraction
ocla04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
139389686
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
139389686
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
139389686
04261 Adrenergic signaling in cardiomyocytes
139389686
Enzymes [BR:
ocla01000
]
7. Translocases
7.2 Catalysing the translocation of inorganic cations
7.2.2 Linked to the hydrolysis of a nucleoside triphosphate
7.2.2.10 P-type Ca2+ transporter
139389686
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Gene cluster
GFIT
Motif
Pfam:
E1-E2_ATPase
Cation_ATPase_C
Cation_ATPase
Cation_ATPase_N
Hydrolase
Hydrolase_3
HAD
DUF4833
Motif
Other DBs
NCBI-GeneID:
139389686
NCBI-ProteinID:
XP_070992674
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All DBs
Position
30:12928332..12975757
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AA seq
1042 aa
AA seq
DB search
MDNAHTKSVEEVYSHFSVNESTGLGLDQVKRQKEKWGSNELPAEEGKSLWELVVEQFEDL
LVRILLLAACISFVLALFEDGEETITAFVEPFVILLILIANAIVGVWQERNAEDAIEALK
EYEPEMGKVYRQDRKTVQRIKAKEIVPGDIVEVSVGDKVPADIRLSSIKSTTLRVDQSIL
TGESVSVIKHTDPVPDPRAVNQDKKNMLFSGTNISSGKAIGVVVATGVNTEIGKIRDEMA
ATEQEKTPLQQKLDEFGEQLSKVISLICIAVWMINIGHFNDPVHGGSWIRGAVYYFKIAV
ALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQ
MSVCRMFILDKAEGNSCSLNEFTITGSTYAPEGEVYQDGRLVKSSAYDGLVEIATICALC
NDSSLDYNEAKGVYEKVGEATETALTCLVEKMNAFDTDIQGLSKIDRANACNSVITQLMK
KEFTLEFSRDRKSMSVYCTANKARSSLGKMFVKGAPEGVIDRCTHVRVGTNKVAMTPGIK
ERIMSTIREYGTGRDTLRCLALATRDAPPRKEDMVLVDCARFAGYESGLTFVGCVGMLDP
PRTEVAASIKLCRLAGIRVIMITGDNKGTAVAICRRIGILSEEDDVDKMAFTGREFDDLS
PQAQRDAVTNARCFARVEPSHKSKIVEFLQGMDEITAMTGDGVNDAPALKKAEIGIAMGS
GTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALG
FPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMNKPPRSAKEPLISGWLFFRYLAIGC
YVGAATVGAATWWFVAAEDGPMISLYQLSHFLQCSPDNPDFADLECHVFESPYPMTMALS
VLVTIEMCNALNSLSENQSLLRMPPWENIWLLGAICLSMSLHFLILYVEPLPVIFQITPL
DLTQWLVVLKISLPVILLDELLKFVARNYLEPGNQPEYKSSGKGWSPSACTEGISWPFVG
ITLPLVLWLYSIDTNVSALFWS
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggataacgctcacacaaagagtgttgaagaagtttatagccatttctctgtcaacgaa
agcactggacttggtttggaccaggtgaaacgtcaaaaggagaaatggggctcgaacgag
ttacctgctgaagaagggaagtctctatgggagcttgttgttgaacaatttgaagattta
cttgtacgaattcttctgctggcagcttgtatatcttttgtcttggccttgttcgaggat
ggagaagaaacaatcacagcctttgtggagccttttgtaatcttactcattcttatagcc
aatgccatcgtgggtgtgtggcaggaacgcaatgctgaggatgccattgaagccctaaaa
gagtacgagcctgagatgggcaaggtctaccgccaggacaggaagaccgttcagaggatc
aaggccaaagaaattgtgccaggagacatcgtagaggtttctgttggagacaaggttcct
gcagacatccgtctctcttccatcaaatctacaaccctgagagtagaccagtctatcctg
accggcgagtccgtctctgtcatcaagcacaccgacccagtgcctgacccccgagctgtc
aaccaggacaagaagaacatgctcttctctggcaccaacatctcgtctggcaaggctatt
ggtgtggtggtggctacgggcgtgaacactgagattggtaagatccgtgacgagatggca
gccactgagcaggagaagacccccctgcagcagaagctggatgagttcggggagcagctg
tccaaggtaatctccctgatctgcatcgctgtgtggatgatcaacatcggccacttcaat
gaccccgtccacggaggctcctggatccgcggcgccgtctactactttaagatcgccgtg
gccctggctgtggccgccatccccgagggtctgcccgctgtcatcaccacctgcctggcc
ctgggcacccgccgcatggccaagaagaatgccatcgtccgcagccttccctctgtggag
accctgggctgcacctctgtcatctgctccgacaagactggcaccctcacgaccaatcag
atgtctgtctgcaggatgttcatccttgacaaggccgaggggaacagctgctctctgaac
gagttcaccatcactggctctacttacgcccccgagggagaagtgtaccaggatggcaga
ctagtgaagtcctctgcgtacgatggtctagtggagattgccaccatctgtgctctgtgc
aatgactcctctctggactataatgaggccaaaggtgtgtatgagaaggttggcgaggcc
acagagacggccctcacctgcctggtagaaaagatgaatgcgtttgacaccgacatccaa
ggcctgtccaagatcgacagggccaatgcctgcaactctgtgatcacgcagctgatgaag
aaggagttcaccctggagttctccagagacaggaagtccatgtctgtgtactgcactgcc
aacaaggcccgctcctccctcggaaagatgtttgtcaagggtgccccagagggcgttatt
gacagatgtacccatgtcagggtgggcaccaacaaggttgccatgaccccaggcatcaag
gagaggataatgtctacaatccgagagtacggaacggggcgtgacaccctgcgctgcttg
gctctggccacccgggacgccccacccaggaaggaggatatggtgctggtcgattgtgcc
cgtttcgctggttacgagtctggcttgaccttcgtgggctgcgttggaatgctggaccct
cccaggacggaggtggctgcctccatcaagttgtgccgcctggccggcatccgagtcatc
atgatcaccggcgacaacaagggcactgccgtggccatctgccgccgtatcggcatcctg
agcgaggaggacgacgtggacaaaatggcgttcacaggccgcgagtttgacgacctgtct
ccccaggcacagcgcgatgccgtgaccaacgcccgctgcttcgcccgtgtcgagccctcc
cacaagtccaagatcgttgagttcttgcagggcatggatgagatcacggccatgactggt
gacggagtgaacgatgcccctgccttgaagaaggcagagattggcatcgccatggggtct
ggcactgccgtggccaagtcagcctctgagatggtcctagccgatgacaacttctcttcc
atcgtggcggctgtggaggagggcagggccatctacaacaacatgaagcagttcatccgc
tacctcatctcctccaacgtgggagaggtcgtctgtatcttcctgacggctgctctgggc
ttccctgaggctctgatcccagttcagctgctgtgggtcaacctggtgacagacggtctc
cctgccactgcactgggcttcaacccccccgacctggacatcatgaacaagcccccccgc
agcgccaaggagcccctcatctccggatggctcttcttcagatatctggccatcggatgc
tatgtgggagctgccacagtgggagctgctacctggtggttcgtggccgctgaggacggc
cctatgatctccctgtaccagctgagccatttcctgcagtgttcccctgacaaccctgac
ttcgccgacctggagtgtcatgtgtttgagtccccctaccccatgaccatggccctgtct
gtgcttgtcaccattgagatgtgcaatgcccttaacagcctgtcagagaaccagtccctg
ctgcggatgcctccctgggagaacatctggctgctgggggccatctgcctctccatgtcc
ctccacttcctcatcctctacgtagagccactgcccgtcatttttcagatcacccctctg
gacctgacccagtggctggtggtgttgaagatctccctgcccgtcatcctgcttgatgag
ctgcttaagttcgtggccaggaactacctggaacccggtaaccagccagagtataagtca
tccggcaaaggctggtccccctctgcatgcacggagggcatctcctggccctttgtgggc
attaccctcccgctggtgctgtggctctacagcatcgacactaacgtgtctgccctgttc
tggtcctga
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