Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139389742
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Entry
139389742 CDS
T10872
Name
(RefSeq) sin3 histone deacetylase corepressor complex component SDS3-like isoform X1
KO
K19201
Sin3 histone deacetylase corepressor complex component SDS3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocla03036
]
139389742
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
139389742
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sds3
Retrotrans_gag
Motif
Other DBs
NCBI-GeneID:
139389742
NCBI-ProteinID:
XP_070992765
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All DBs
Position
30:36070186..36080883
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AA seq
319 aa
AA seq
DB search
MASTLLSPMVDYYNDEEELDSVDDDDDRSFRGRDSEEDTEDASETDLAKHDEDDYVEIKE
QMYQDKLASLKRQLTQLQEGTLQEYQKRMKKLDQQYKERVRNADLFLQLETEQVERNYIK
EKKAAVKEFDDKKVELKENLIAELEEKKKMIENEKLTMELTGDSMEVKPIMTRKLRRRPN
DPVPIPDKRRKPAPAQLNYLLTDDQILEDLRILNKQLKSPKRPVSPSSPDQMPTIPMEAP
SQRYEARIEEGKLYYDKRWYHKSQAIHLESKENTKISCVISSVGTNEIWVRKTSDSTKMR
IYLGQLQRGAFIIRRRSAA
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggcttctactttactatcaccgatggtagattattacaatgatgaagaagaacttgat
agtgtggacgacgacgatgatcgaagcttcaggggaagagactcggaagaagacacagaa
gatgccagtgaaactgacctggcgaaacatgatgaggatgactatgtggaaatcaaagaa
cagatgtaccaagacaagctggcatcattgaaaaggcagttgacgcaactccaagaggga
acacttcaggagtaccagaagagaatgaagaagctggaccaacaatacaaggagagagtc
cgcaatgctgatctctttctccaacttgagacagaacaggtggagaggaactacatcaaa
gagaagaaggcggcggtgaaagagtttgacgataagaaggtggagctgaaggaaaactta
attgctgagctagaggagaagaagaagatgatagagaatgagaaattaacaatggagctg
acaggcgattccatggaggtgaaacccatcatgacccggaagttaaggaggcggcccaac
gatccagtccccattccagacaagcggcggaaacctgcacctgctcagcttaactatttg
ctaaccgatgaccagatcctggaagatctgcgaatactgaacaagcagctgaaatctcct
aagcgtccagtgtctccgtcgtctccagaccaaatgcccaccattccaatggaggccccc
tcacagcgctatgaggcccgcattgaagagggaaagctgtactacgacaagagatggtat
cataagagccaggccatccacctggagtccaaggagaacaccaagatcagctgtgtcatc
agctcagtgggaacaaatgagatctgggtgaggaagaccagcgacagcaccaagatgagg
atctacctgggacagctacaaagaggagcgtttatcatccgacggcggtcggcagcgtag
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