Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139389819
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Entry
139389819 CDS
T10872
Name
(RefSeq) huntingtin interacting protein 1 related b
KO
K20040
huntingtin-interacting protein 1-related protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139389819
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
139389819
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANTH
I_LWEQ
HIP1_clath_bdg
Motif
Other DBs
NCBI-GeneID:
139389819
NCBI-ProteinID:
XP_070992886
LinkDB
All DBs
Position
30:20099314..20137914
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AA seq
1068 aa
AA seq
DB search
MNSIRQVPSRVKTKRTETNLGAEREHFDKQQLSSISKAINSNEAPVKEKHARRIILGTHR
EKGAFTFWSYALGLPLSSNSILSWKFCHVVHKVLRDGHHNSLQDCMRHHSNIVETGQLWG
NLHDRYGQLVALYAKLLCTKMEFHVKHSEIRANLEVTDEVLERVAGTDINNVFQLTVEVF
DYLDTELRLAETVIRQLNTSIAISTLTSGQCRLSPLIQVIQDCSHLYHFTVKLLFKLHAC
LPADTLQGHRDRFHDQFHSLKTFFNKARDMMYFKRLIQIPKLPESPPNFLHAASLAKHAR
PVVVIPDEDEPEQVDDDDDDPEPLINVSDVTVPSMAVPQQFDIFDQTFGPANGGFDDRDI
QIENLKRDLELLRTDLERVKGEAQRYITQLKSQINSLEAELEEQQVQKQRALVENEQLRM
ELEATRRRNAEHESVQATFGEAETRAQATEQRYNKLKEKHTELVSSHAELLRKSADTVKM
LSATQQTQEEVERTKQQLAFEVDRIKQDADMKLEEQKFEMEKLKREFEEKKAEVERVKGT
LQSNEKVGEQQTRSMSALQAEKERLMHSVSEKEAALSALRHAAQLQQSSLQQERERRTRE
LGELQGRLQEKSSREEQLQQKLLEEQFSLLQGTVSEAESIIQDAVAKLDDPLHIRCTSSP
DYLVSRADATLGSIDKVKRGHSDYLTNMGDVGGLLRALTQFSHLAADTIINGSATAHMAP
TDHADRLTENCRGCATQSLQFLKDLKSKASLQRADPASIRIVVQKILRLGEELRPKGVDV
RQDELGDLVDKEMAATSAAIEEAVRRIDEMMNQARKDTSGVKLEVNERILYSCTDLMKAI
HLLVLTSTDLQKEIVEGGRGAATIKEFYARNSRWTEGLISASKAVGWGATQMVESADKVV
LHTGKYEELIVCSHEIAASTAQLVASSKVKADRNSTKLTALQQASRRVNEMAANVVASTK
TGQENLEDKDTMDFSGMSLIKLKMEEMESQVKVLELENQLGNERLRLGELRKKHYDIAGV
PAAGLSEGNGLAPSSASEPSSPKPSKPSIMRKPALAQKPNLPPKNMFR
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgaattccatacgacaggtgccttcaagggtgaaaaccaaaaggaccgaaacgaattta
ggtgctgagagggaacattttgataaacagcagctcagcagcatcagcaaagccatcaac
tccaacgaggcgcctgtgaaagagaaacatgcacgccggatcattctggggacccacaga
gagaagggagcctttaccttctggtcctatgccttgggcctccctttgtccagcaactcc
atcctcagctggaagttctgccacgtggtgcacaaagtgttgcgggatggccaccataat
agccttcaggactgcatgagacatcacagtaacatagttgaaacagggcaactatggggc
aaccttcatgacagatatggccagctggtggctctgtacgctaagctcctctgcacaaag
atggagttccacgtgaagcattctgaaatccgagccaacctagaggtaacagatgaggtt
ctggagcgcgttgcaggaacagacatcaataatgtgttccagctcactgtggaagtgttt
gattacctggatacagagctgaggctagccgagacagtgatccggcagctcaacacgtcc
attgccatctctacgctgacgtcaggccagtgtcgcctgtcccccctcatccaggtcatt
caggactgcagtcacctctaccacttcaccgtcaagctgctcttcaagctgcacgcttgt
ctcccagcagacaccctgcaaggacatcgtgatcgtttccatgaccagttccacagcctc
aagaccttcttcaacaaagccagagacatgatgtacttcaagagactcatccagatccca
aagctgccagaatcccctcctaatttcctgcatgcggcttccctggccaagcatgcaagg
ccagtggtggtcatcccagacgaggatgagcccgagcaggtggatgatgacgatgacgac
cctgaaccgctgatcaatgtcagtgacgtcaccgtgcccagcatggcggtgccacagcag
ttcgacatatttgatcaaacctttggacctgccaatggtggttttgatgacagggatatc
cagattgagaacctcaagcgggacttggagctattgaggacagatctggaaagggtcaaa
ggagaggcccagcgctacatcactcagcttaagtcccagatcaacagtctggaggcggag
ctggaggagcagcaggtacagaaacagcgtgccttggtggagaacgagcagctgcgcatg
gagctggaggccacgcgccgccgcaatgctgagcatgagagtgtgcaggccaccttcgga
gaggccgagacaagagcccaggccacagagcagcgctataacaagctgaaggagaagcac
actgagctagtgtctagccatgcggaactgctcaggaagagtgcagacacagtgaagatg
ctgtcagccacccagcagactcaggaggaggtggagaggactaagcagcagttggctttt
gaggtggatcgcatcaaacaggatgctgacatgaagcttgaggagcagaagtttgagatg
gagaagcttaaaagagagtttgaggagaagaaggcagaagtggaacgtgtcaaaggcact
ctgcagagcaacgagaaggtgggggaacagcagaccagatccatgtccgccctgcaggcg
gagaaggagcgtctgatgcactctgtgagtgagaaggaggcagcactgtcagccctgcgc
catgctgcacagctgcagcagtcatccctgcagcaggagagggagaggagaaccagggag
ctgggagagctgcagggcaggctgcaggagaagtctagccgtgaggagcagctgcaacag
aagctgctggaggagcagttctctctgctgcagggaacggtctctgaggctgagagcatc
atccaggatgctgtggccaaactggacgaccccctgcacatccgctgcaccagctcccca
gattaccttgtcagtcgggcagatgccactttaggctccattgacaaagtgaaaaggggt
cactcagactacctgacgaacatgggagatgttggtggactgctgagggccctgacccag
ttctcccacctggctgctgacaccatcatcaacggcagtgccacagcgcacatggctccc
accgaccacgccgaccgtctgactgagaattgcaggggctgtgccactcaaagtctgcag
ttcctgaaggacctcaagtccaaggcctctctccagagggcagatccggcctccattcgc
attgtggtccaaaagatcctgaggcttggggaggagctgcgacctaaaggcgtggatgtg
cgacaggatgagctgggagatctggtggacaaggagatggcagcaacatcagcagccatt
gaggaggcagtgcgcagaatcgatgaaatgatgaatcaggcacgaaaggacacctctggc
gtcaaacttgaggtcaatgaacgaatcctctacagctgcacagacctgatgaaggccatc
catctactggtcctgacatcaaccgacctacagaaggagattgttgagggagggaggggt
gcagccactattaaggaattctacgccaggaactcccgttggactgagggactcatctct
gcctccaaagctgtgggatggggagccacacagatggttgagtctgctgataaagtggtg
ctgcacactggtaaatatgaggagctcatcgtctgttcacacgagatcgctgctagtaca
gcacagctggttgcttcctccaaggtaaaggcagaccgcaacagtacgaaactgacagct
ctccagcaggcatctcgccgtgtgaacgagatggcggccaacgtggtggcctccaccaag
acaggccaggagaacctagaggacaaggataccatggacttctctggaatgtccctcatc
aagttaaaaatggaggaaatggagtcgcaggtgaaggtgttggagctagagaatcagctg
ggtaatgagcgtctgcgtctgggagagctcaggaagaagcactatgatatagcaggtgtt
ccagcagcaggcctctcagagggcaatggcctggccccctcatctgcctctgagccctcc
tcacccaaaccctccaagcctagcatcatgaggaaacctgccttggctcagaaacccaac
ttaccacctaaaaatatgtttaggtag
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integrated database retrieval system
