Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139389855
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Entry
139389855 CDS
T10872
Name
(RefSeq) E3 ubiquitin-protein ligase KCMF1-like
KO
K22376
E3 ubiquitin-protein ligase KCMF1 [EC:
2.3.2.27
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139389855
Enzymes [BR:
ocla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139389855
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139389855
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Di19
ZZ
Zn_SUZ12
zf-C2H2
Di19_C
SWIRM-assoc_1
ATG14
Motif
Other DBs
NCBI-GeneID:
139389855
NCBI-ProteinID:
XP_070992943
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All DBs
Position
30:complement(42317383..42326834)
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AA seq
406 aa
AA seq
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MSRHEGVSCDACLKGNFRGRRYKCLICYDYDLCASCYEGGATTTRHTTEHAMQCILTRVD
FDLYYGGEALSVEQPQAFTCPYCGRMGYTETSLQEHVAAEHTETSSEVICPICASLPGGD
PNHVTDDFAAHLTLEHRAPRDLDESSGVRHVRRMFHPGRGLGGPRARRSNMHFTSSTSGG
SSTTQTSTQSSNYNREAMDPIAELLSQLSGVRRSAGGQLSSGPSASQLQQLQMQLQLERQ
QTQAARQQLETARSATQRSSRTSTNAGLNANPSPGHHNANPSSNSTSPNPGHHEFTTHTQ
HSNSQFLLNRLSEPRLSEAERQLSEGQWADRSLFVTELLLSTLLADPDHSEDDDLHDYHD
AVIRGSDAFSDFGTFGDMGCVEVMTLDVALENLNLREQKEQRPPPL
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtcatgaaggtgtgagctgcgatgcgtgtttgaagggtaacttccgggggcgg
cggtacaagtgtttaatttgctacgactacgacctgtgtgcgtcgtgctacgagggcgga
gccacgaccaccaggcacacaacagaacacgccatgcagtgcatactaaccagggtcgac
ttcgacctatattatggaggagaggccttgtcagtggagcagccacaggcctttacctgt
ccctactgtggcaggatgggctacacggagacctcccttcaggagcacgttgctgcagag
cacacagagacctcctcagaggtgatctgtcccatatgtgcttcgctgcccggcggggac
cctaatcacgtgactgacgacttcgctgctcatctcacacttgaacacagagcccccaga
gacttggatgagtcgagcggggtgcggcacgtgcgtaggatgttccacccgggtcggggt
ctaggggggccgagggcccgtcgatccaacatgcacttcacctcctcaacctccgggggg
agctctaccacacagacctctacacagagctccaactacaacagggaggccatggatcct
atagctgagcttctctcccagttgtcgggggtgcgtaggtcggcgggcggacagctgagt
tcaggtccttcagcatcccagctacagcagctccagatgcagctccagttggagcggcaa
caaacccaggctgccagacagcaattggagacggcccggagtgccacgcaacgcagcagc
cgtacctccaccaacgcagggctgaatgccaatccaagcccagggcatcacaacgccaac
cccagttccaactctaccagccccaacccagggcatcacgagttcaccacacacactcag
cacagcaactcccagttcctcctcaacagactgagtgagccgaggttgtcggaggcggag
cgtcagctgagtgagggccagtgggcggatcgctctctcttcgtcacggagctcctcctc
tccaccctgctggccgatcccgaccacagcgaagatgacgatctccatgactaccacgac
gccgtgatccgaggttctgacgcgttcagtgatttcggcaccttcggagacatgggctgc
gtggaggtcatgaccttggacgtggcgttggagaacctcaacctccgagaacaaaaggag
cagcgacccccgcctctttga
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