Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139389861
Help
Entry
139389861 CDS
T10872
Name
(RefSeq) E3 ubiquitin-protein ligase ARK2C-like isoform X1
KO
K17821
E3 ubiquitin-protein ligase RNF165 [EC:
2.3.2.27
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139389861
Enzymes [BR:
ocla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139389861
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139389861
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
U-box_ZFPL1
zf-ANAPC11
zf-RING_Vps41
zf-RING_16
RINGv
zf-RING_4
zf-Nse
zf-RING-like
zf-RING_10
Prok-RING_4
zf-P11
Motif
Other DBs
NCBI-GeneID:
139389861
NCBI-ProteinID:
XP_070992952
LinkDB
All DBs
Position
30:31209101..31219779
Genome browser
AA seq
348 aa
AA seq
DB search
MVLVHVGYLVLPVFGSVRNRGSHFNRQQQQHSHATSCRHFQLGPQAQLPIDFPMPHPGQP
QSGINPHLAPPGHQHSPQLHPPLNPLPPTPQFQDISAPPFLPQALHQQYLLQQQILETQH
RRIMPPSSRHQPHRLRPGYEFAPALHIPPQPAAQQPRYLAEGTDWDLSVDAGLPPPQYHV
RPLPQHYHHYLTSPRMHHFPRNNASTQVVVHEIRNYPYPQLHLLALQGLNPSRHASAVRE
SYEELLQLEDRLGSVNRGAVQTTIERFTYPHKYKKRIPQDLKLGLVDEELDTDEKCTICL
SMLEDGEDVRRLPCMHLFHQACVDQWLATSRKCPICRVDIETQLAPDS
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggttttagtgcatgtcggatatctggttcttcctgtatttggctcagtaagaaataga
ggatcccactttaaccggcagcagcagcagcatagccatgctacctcttgtcggcacttc
cagctaggcccccaggcccagctgcccattgacttcccaatgccccacccaggtcagccc
cagtcgggcatcaacccccacctggctccccctggccatcagcattctccccagctccac
ccgcccctcaaccccctaccccccacaccccagttccaggacatttctgccccccctttc
ctacctcaggccttacaccagcagtacctcctccagcagcagatcctagagacccagcac
cggcgcatcatgccaccttccagcagacaccagccccacagactgcggccgggttacgag
tttgctcccgccctccacatccccccacagcctgcggcccagcagcctcgctacctggct
gaaggcacagactgggatttgagtgtggacgcggggctccctcctcctcagtaccacgtc
cgcccactgccccagcactaccatcactacctgacatctcccaggatgcatcacttcccc
aggaacaatgcctccacccaagtggttgtccatgagatcagaaactacccgtatcctcag
ttacacctgctggctctgcagggcctcaacccctcccgccacgcatcagctgtgagagag
agctatgaggagctactgcagctggaggacaggttgggcagtgtgaaccgaggggctgtc
cagaccactattgaaaggtttacctaccctcacaaatacaagaagaggatacctcaggac
ctgaagctcgggctggtggatgaggaactggatacagatgagaagtgtaccatctgtcta
tcaatgctggaggatggagaggatgtcaggagattaccctgcatgcatctcttccaccag
gcgtgtgtggaccagtggctggccaccagtaggaaatgccccatatgcagggtggacatt
gagacccagctggcaccagacagctga
DBGET
integrated database retrieval system
