Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139389873
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Entry
139389873 CDS
T10872
Name
(RefSeq) protein crumbs homolog 1-like
KO
K16681
protein crumbs
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
Laminin_G_2
Laminin_G_1
EGF_CA
EGF_2
EGF_3
EGF_MSP1_1
Laminin_G_3
EGF_DL_JAG
EGF_Teneurin
TMEM154
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
139389873
NCBI-ProteinID:
XP_070992975
LinkDB
All DBs
Position
30:11899395..11923325
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AA seq
1483 aa
AA seq
DB search
MEFGRFHSKYQKPLLLIMMTFKLGILCTAAADKCLSAPCQNGGTCLDQMGNYTCLCPRWP
VRYMGKDCRELYDPCVHDAPCANCTSTLGTEVYTCHCPDNFAGTNCTLNINIKCESNPCK
GVRSHCVDRVDSYTCHCPPGYGGDHCQARDCTEEPCHNGATCVDTSDGYQCQCVPGFQGR
DCEENMDDCKSLPCQNGAICKDDVNGYQCFCVPGFQGYHCDLDINECVSRPCKNNGTCVN
EVDRYECKCLLGFKGVNCEVEIDECEEQPCQHGATCHDRVGLYTCECVSGYEGRDCELDI
DECASGPCLNEGNCTDLVNSYECNCNGTGFTGEQCEVDISECASDPCQNGATCLEGINQY
DCVCWTGYEGKNCQVDIDECELQPCENGGECFQRSELLHYGVLSGLDDREFNYEEAAGFL
CHCQPGFAGESCEENIDECESAPCQNGGSCEDLVNSYQCDCSPGFTGMHCEVDIDECESE
PCQNGGSCKDAANSYTCNCVTAGPGEEPWGGHNCDVRLIGCREHLCENGATCVPILSQEE
HSGEDGDEQEHDHTCLCHPGFTGKHCSIPTTFSFNREGYVLIQLPPTANRTSRGIDPQHH
HHHYGIHIQLRFRTTLDEMLLFYRGAEDYSVSLEIVGGHIHARAGSGKELQATYHLPVND
GDWHEAKVTMDEKLVLMVKGPGCDNDGGCTVEDEGHNQLIFFQPGSFPQVYVGGAPQKYL
DNTESRKGFIGCMEDLQVDHQLLLPQDISPEHVQDMELGCNKTDWCHPDPCHHRGHCIDL
WTSFSCECDRPYHGSLCEEEYPSWTFSNEDTVSYAAFNINQTDGENFNISFFLRSLKPSG
LLLQLRRGRRAYLTLYLREGTLVFNSPPTTLFSNGTYITSGQSEPVTVVVRQGQVGFSQG
GTQLSLGRVRMEQGDVVYMGGLPPGESTAPWGGHFKGCLQDITLDHMHLYLHLPEEECHT
HEAFECYIPQKSENMLDGCVSDEACKAGPCQNGGTCTVTWNDFECTCPMNFSGRRCDTRV
WCVSDPCVVGSQCVDLVDGYECLTNATFESNALQFTANGSLVATVTSVSMDIRTREENGV
LLRATNGAEVFCLGLLNSSLLVKLLSGNSLELQAFTSDLPISDGAWHHLHLAMTDPLQPV
SRWRLTVDGRRAGSTMGTAGHLNFLNNTTVWLAENYTGCLGEVRVGGVYLPLLDDQDAPQ
AARFIRQGGQENKMGCVGTDVCQYQPCLNQGTCQDLWNLFNCSCSPGWEGEFCQRDTDEC
ASGPCAHGTCTDLLANYQCECHKGWGGRDCEEEVDDCLEHSCLNGGSCLDGTGTYQCVCP
PGYTGRRCQWRFPPQQCDEETQCDNGGVCVDGIWGTNCTCKPGYTGDWCEAEIDECESRP
CLNGATCLDRLSSFQCVCVPGFSGTQCESNRQEQRQRVPWLVVAIPLASLCVLLAVVALV
FMVLTARKKRQSEGTYSPSAQEVAGARLEMGSVLKVPPEERLI
NT seq
4452 nt
NT seq
+upstream
nt +downstream
nt
atggagtttgggaggtttcattcaaagtaccaaaaacctttgctgctcatcatgatgacg
ttcaaactgggtatactgtgcacagcagcagcagacaagtgtctgtcggccccgtgtcag
aatggcggtacgtgtctcgaccaaatgggcaactacacgtgtctctgtcccagatggcca
gtccgctatatgggcaaggactgtagggagctgtatgacccctgtgtccacgatgcgcca
tgcgccaactgtaccagcacactgggcacagaggtctacacctgccactgccccgacaac
ttcgcagggaccaactgcacactcaacatcaacattaagtgtgagagcaacccatgtaag
ggtgtcaggtcccattgtgtggacagggtggatagctacacctgccactgtccccctggc
tatggaggagatcactgccaggcgagggactgcactgaggagccgtgccacaacggtgcc
acctgtgttgacacatcggatggctaccagtgccagtgcgtcccaggcttccaggggagg
gactgtgaggagaacatggatgactgtaagtcactcccttgtcagaacggagccatctgt
aaagatgacgtcaacggataccagtgcttttgtgtgcctggtttccaaggctaccactgc
gacctggacattaacgagtgtgtgtcgcggccgtgcaagaacaatgggacctgtgtcaat
gaggtggaccgctatgagtgcaaatgtctgctagggttcaaaggggtgaactgtgaagtg
gagatcgatgagtgtgaggagcagccctgccagcatggagccacctgccacgaccgtgtg
ggcctgtacacctgtgagtgtgtttccgggtacgagggccgtgactgtgagctggacatt
gatgagtgtgccagcgggccgtgtctcaacgagggcaactgtacagacctggtgaacagc
tatgagtgtaactgcaacgggacaggcttcacaggagagcaatgtgaggtggacatctca
gagtgtgcttcggacccctgccagaatggagccacctgcctagaggggatcaaccaatac
gactgtgtctgctggacaggttatgaagggaagaactgtcaggtggatattgatgagtgt
gagctgcagccctgtgagaacggaggagagtgttttcagcgctcagagctgctgcactac
ggggtgctgtctggactggatgacagggagttcaactatgaggaagcagctgggttcctc
tgccactgtcagcctgggtttgctggtgagagctgtgaagagaatatagacgagtgtgag
tctgctccatgtcagaacggagggagctgtgaggacctggtcaactcataccagtgtgac
tgttcacctgggttcacaggtatgcactgcgaggtagacattgacgagtgtgagagcgag
ccctgtcagaacggcgggtcctgcaaggacgccgccaactcctacacctgcaactgtgtg
acggcgggtccaggggaggagccatggggtggccataactgtgacgtccgtctgattggc
tgcagggaacacctgtgtgagaacggagccacgtgtgtgcccatcctaagccaagaagag
cacagtggggaagatggggatgaacaagagcatgaccacacctgcctctgtcaccctggc
ttcactgggaagcactgcagcattcccaccaccttctccttcaacagagaggggtatgtc
cttatccagctccctcctacagctaacaggaccagtagagggattgacccccagcaccac
caccaccactatgggatccacatccagctgcgcttcagaaccaccctggatgaaatgctg
ctgttctacagaggggctgaggactacagtgtgtccctggagattgtggggggccatatc
catgctagagctggatcagggaaggagctacaggccacctaccatctccctgtcaatgac
ggagactggcatgaggccaaagtgaccatggatgagaagctggtgctgatggtgaaagga
ccaggctgtgacaatgacgggggatgcacagtggaggacgaaggacacaaccaactcatc
ttcttccaacctggatcattcccccaggtctatgtgggtggggccccccagaagtatctg
gacaacacagagagtaggaagggtttcattggctgcatggaggatctacaggttgaccac
cagctgctactgcctcaggatatctctccagagcacgtccaagacatggagctgggctgc
aacaagaccgactggtgtcatcctgatccttgccatcatcgtgggcattgtattgacctg
tggactagcttcagctgtgagtgtgatcgaccctatcacggctccctgtgtgaagaagaa
tacccctcatggacattcagtaatgaagacactgtgagctatgctgccttcaacatcaac
caaacggacggggagaacttcaacatctccttcttcctgcgctctctgaagcctagcggc
ctgctcctccagctgcggagagggaggagggcctacctcaccctgtacctgcgggaggga
accctggtcttcaacagcccccccaccaccctgttctctaacggtacctacatcaccagc
ggacagagcgagccggtcactgtagtggtacgccagggtcaggtagggttcagtcagggt
gggacacagttatccctggggcgggtgaggatggagcagggggacgtggtgtacatgggg
ggtctgccaccgggggagtccactgccccctggggaggtcacttcaaaggctgcttacag
gacatcactctggaccacatgcacctgtaccttcacctcccagaggaggagtgccacacc
cacgaagcgtttgagtgctacatcccccaaaaatcggagaacatgttggatggctgtgtc
agtgatgaggcatgcaaggctggtccctgtcagaacggaggaacgtgcacagtcacctgg
aatgactttgagtgcacctgtcccatgaacttctctggcaggcgatgtgatacacgcgtg
tggtgtgtcagcgacccctgtgtcgtgggcagccagtgtgtggatctagttgacggttac
gagtgcctcactaacgccacctttgagagcaacgctctgcagttcacagctaatggctcg
ctggttgccacggtgaccagtgtctccatggatatacgtactcgggaggagaacggtgtg
ctgctgcgggccactaacggagcagaggtcttctgtctgggtttgctcaactcctccctg
ctggtcaaactactgagcggcaacagcctggagctacaggccttcaccagcgacctgccc
atctcagacggggcctggcaccacctccacctggccatgacagaccccctgcagcctgtg
tcccgctggcgcctcactgtggacgggcgcagggctggcagcaccatgggcacggccggg
cacctcaacttcctcaacaacaccaccgtgtggctggcagagaactacacaggctgtctg
ggagaggtgagggtgggaggagtttacctacctctgttggacgaccaagatgccccccag
gcagcccggtttatcagacagggagggcaggagaacaagatggggtgtgttggtactgat
gtgtgtcagtaccagccctgcctcaaccagggcacctgccaggacctctggaacctgttc
aactgcagctgttccccgggctgggagggagagttctgccagagggacacagacgagtgt
gcctcaggcccctgtgcccacggcacctgcacagacctgctggcaaactaccagtgtgag
tgtcacaaaggatgggggggcagggactgtgaggaggaggtggatgactgcctggagcac
agctgtttgaacgggggctcctgcctagacgggacgggtacctaccagtgtgtctgcccc
cctggatacaccggccgccgctgccaatggagattccctccacagcagtgtgatgaagag
acgcagtgtgacaacggtggggtctgcgtggatgggatctggggtaccaactgcacctgc
aaacctggctacactggagactggtgtgaggcagagatagatgagtgtgagtccagaccc
tgtctcaacggtgctacctgcctggaccgactcagcagcttccagtgtgtgtgtgtgccg
ggcttcagcggcacacagtgtgaaagcaatagacaggagcagaggcagcgtgtgccctgg
ctggtggtggccatccctctggccagcctgtgtgtgctgctggctgtggtggccctggtg
ttcatggtgctgaccgcacgcaagaagcgccagtcggagggcacctacagccccagcgcc
caggaggtggcaggggcacggctggagatgggcagtgtactcaaagtgccccccgaggag
aggctcatatga
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