Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139389899
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Entry
139389899 CDS
T10872
Name
(RefSeq) RNA-binding protein Musashi homolog 1-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
139389899
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocla03019
]
139389899
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
139389899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
NID
PHM7_cyt
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
139389899
NCBI-ProteinID:
XP_070993016
LinkDB
All DBs
Position
30:complement(13519239..13566481)
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AA seq
370 aa
AA seq
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MDTEGSQSSLSSTDSPHDPCKMFIGGLSWQTTQEGLKDYFCKYGEVKECMVMRDPVTKRS
RGFGFVTFVDQAGVDSVLAVTRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNT
TIEDVKAYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEMHFHEINSKMVE
CKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGRGQHCFTQTQTHDCPFTIGYPG
FQTATYTSRSYTGITPGYTYQFPEFHLERTPLLTSPHPPELTAIPLSAYGPMAVAAAAVV
RGSAPSRSGGFSSPGPMADLYAAANQESAVSSYLSAASPSPNTGFGHSLGVRHSPYHGPL
IATAFTNGYH
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggatacggaagggagccagagcagcctgtcctccacggactcccctcacgacccctgc
aaaatgttcataggcggtctcagctggcagacgacacaagagggattgaaagactacttt
tgcaagtatggcgaggtgaaggagtgcatggtgatgcgggatccagttaccaagcgctct
agaggttttggatttgtcacgtttgttgaccaggccggtgtggattcagttttggcagta
accaggcatgagttggattcaaaaacaattgatccgaaagttgcattccctcgtagagcc
cagcccaagctagtgactcggaccaagaagatttttgttggaggtctatccgtgaacacg
accattgaggatgtcaaggcgtatttcgagcagttcggaaaggttgatgatgccatgctc
atgtttgacaagaccaccaacagacacagagggtttggctttgtcacgtttgagaatgag
gatgtggtggagaaagtgtgtgagatgcacttccatgagataaacagcaaaatggtggag
tgtaagaaggctcagcccaaggaagtgatgtcacccacgggctcggccagggggcgctct
cgggtgatgccctacggcatggatgccttcatgctgggcatcggcatgctgggcaggggg
cagcactgtttcactcaaacacagacccatgactgtcctttcaccataggttacccaggg
tttcagacagctacgtatactagtcgaagttacactggcatcacccctggatatacctat
caattccctgaattccatttagagaggaccccccttctgacatcaccacacccccctgag
ctcacagccattcctctgtcggcatacggaccaatggcagtggcagccgcagcagtagta
agaggctccgccccctctcgctctggggggttcagcagccctgggccaatggcagactta
tatgcagcagccaatcaggagtctgctgtcagcagttacctcagcgctgcaagcccctcc
ccaaacactgggttcggccatagtctgggggtaagacacagcccttatcacggtcctctg
attgctacggccttcactaatggctaccactga
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