KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139389971
Entry
139389971         CDS       T10872                                 
Name
(RefSeq) coiled-coil domain-containing protein 117-like
  KO
K27967  coiled-coil domain-containing protein 117
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ocla03036]
    139389971
   03400 DNA repair and recombination proteins [BR:ocla03400]
    139389971
Chromosome and associated proteins [BR:ocla03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    139389971
DNA repair and recombination proteins [BR:ocla03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     139389971
SSDB
Motif
Pfam: CCDC117 AFDN MerR-DNA-bind
Other DBs
NCBI-GeneID: 139389971
NCBI-ProteinID: XP_070993127
LinkDB
Position
30:20824152..20828128
AA seq 287 aa
MHHPSPMSSELGLLPAMYSFPGLINVTEIGINIGPANTCQHLPGVLPPNTSWERRCLRKH
RRRADDEGCSAKKRRLMEEAGCDPLDYLSPKVFHNWPPGNSIPPLPESSSQALPQPCLGT
QDLGLPLSGSSSALACPEAEGSCMEVEAAQRRLQEIEERITLEDDDDDEDLDVEPAPRRP
MLVMSDSLREGLQRGISDILPHTVAQSVSHSCMELVVWRPPEVALARRLKDSLQRQRKQQ
ITSRQPPSPSASLSSLTPTNTPGETYSPMYCSPGAGAHSAGEEDMEL
NT seq 864 nt   +upstreamnt  +downstreamnt
atgcatcatcctagccccatgagcagtgagctgggcttgttgcctgccatgtactcattc
cctggccttatcaacgtcactgaaatcgggatcaatattggccctgcaaatacctgtcaa
cacctgccgggagtgttgcccccaaacacgagttgggagagacgatgcctgagaaagcac
aggaggagagcagatgacgaaggatgcagtgccaaaaagaggaggctgatggaagaggca
ggatgcgatcctttggattacctcagccccaaagtgtttcataactggccaccaggcaac
agcatcccccctctacctgaatcatctagccaagcactcccccagccctgtctggggact
caggacctggggctgcccttatccgggtcttcctccgctctggcctgtccagaagcagaa
ggctcctgcatggaggtggaggcagcacagaggagactgcaggagattgaggagaggatc
accctggaggatgatgacgacgatgaggacctggatgtggagccagcacccaggaggccc
atgctggtgatgtctgacagtctgagggaggggcttcagcgtggcatcagtgacatcctc
ccccacactgtggcccagtctgtgagccactcctgtatggagctggtagtatggcgcccc
ccagaggttgcgctggcccggcggctgaaggactccctacagaggcagaggaagcagcag
attaccagcaggcaacccccgagccctagtgcctctctgagttccctcacccccacaaac
accccaggggagacatactcccctatgtattgcagcccaggggcaggtgcccacagcgct
ggagaggaggacatggagctgtag

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