Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139389979
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Entry
139389979 CDS
T10872
Name
(RefSeq) PDZ domain-containing protein 2-like isoform X1
KO
K24058
PDZ domain-containing protein 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
139389979
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Paralog
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GFIT
Other DBs
NCBI-GeneID:
139389979
NCBI-ProteinID:
XP_070993144
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Position
30:complement(44418737..44656821)
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AA seq
3094 aa
AA seq
DB search
MPITQENALSHIHLLEDWLLVAQTRYEDHYGDPDQQSTTSRDPDQDSYQESEHEEDACST
VGGSTVGGSTVNSGGCRGTREDMSLCQAATQKLMEYIQLNFTEEGEIQSTALRPTTPCGG
VDAEVRAVCLTKREGDGAELGLSFGNIPIFGDPEGEDRKKGGGRRRRRRKGDQGPVLDVG
CIWVTEVRKRSPAAKCGRIKLRDELLSLNGQLMVGVDVTGASYLADQCWNGGCIYLIMLR
RIKRKAPLPPCNGNGNATITGGSGGIQDGRNSLHHRSSVSSEPLPTQTGGSKRTRKFGII
ARSTFNRDSKELGPKNDSWDDGGGETLENGYRGHGDSAISMDTRVTPPEPSSCTTSMDTP
PEEEPREPRTVLPPLAIPHHLQNGGGTATLPNRFHRGLSEHKTESLSSDASCQPREGSRI
WKMHMVKGQEGLGIQITGGRGSKRSPHGIIIAHVEEGGATQRDGRLKAGDELLMINGQSL
VGLSHSEAVDILRSTAGLVQLVVASREESEVDFHRYPSTSLPDLVSTCASSSSSSASPSD
NQENMEPHHRHGVWEDLAASSLSLSRSRPTTLTDLEKVEDRGRVEGQKDTCRSPTSMKFR
SRSQGGGSRLESVGEDDELIVENGEAGSDMVEKPTRGGRKHSLPQQLDTVGIRQEYQIVK
KSARSLSTFQVESPWRLAQPSIISNIVLMKGQGKGLGFSIVGGQDSARGRMGIFVKTIFP
NGAAVADGRLKEGDEILEVNGDSLQGLTHQQAIQTFKQLKKGVVTLTVRTRLRSPSLTPC
PTPTLLSRSSSPNSNASGGNPTPVPTTFDEPPETRKGPPGPGPKDRIIMEVTLNKEPGVG
LGIGTCCLTLENSPPAIYIHSLAPGSVAKMDGRLSRGDQVLEVDSVSLRHVALSEAYAIL
SECGPGPVSLIISRHPNPKVSEQEMDDVITRSSHRDSLSKDGHASQTLGMPSKSPSLTVK
AKQADGSSLSWTMKRFLEPASRQGSLSSEAELSQYFSQEVTSHSSLSETTAMGSSDDDML
HHRSCNTSIDDTPATQPHGLKDASGVGVEVSVEVRTDDKAPGVPVLNRPVETTQRQTSVC
SPGSNSVRSPLLRQRRVICRDDEVSDDEDAVTLPFRQVAGRVPAMGVVADSGIMISTSSV
ELDEESEGPHILLHSNSLESQEGVGFVPSSGAESPFMPIRQSDHHQTPGGGGGSFPTTGP
SNLGVRMDSQGPLEPKHSPKLEHKAVTRVKSMLSIEAPPIQPTNQQNQNQRTKGEESPTS
SSSQSLAPQPGVGSSHSLGRPGCNPNLLCKKGEACSELAGEEPAHCTIDKVVLRRSEEES
FGLDLEIRSSPLKVVITGLRIGGAAERESRGRMCVGDEIVSIGDTPTCSSSYHDICELMH
NLPVTLALEVKRPMSAVDRLSSLMMSSGSCDVMGPSNGGAPNPGSPSSSSPTNHNPKPTT
PINHNHSNDIPVTYIDDVMTRLSSSDVKSALSSNTLKAPSEAQRTEPMACKSAVDSKALP
ENEKSRVQTPPALPSQLDFSVLDSGKKCCLMPVGKTFLNNYSRNFSSNLTDEGMNALSNR
VESDSNCNMYDMVGGSDSESEDTATDNSRGAAGDNKPASRSVGAEPQDTDSDEKEVEICY
SEAQRPSTLSQAALTHLTDGPLSPQLHISISGSDGSHSTKETRPFDVALDSAASSSSTVT
TTSAASQQNEDCSVVTTQSNPNQKPFPSLSQGLPASGSLSSGAFLAVEAKGSPCQEMPRQ
SSNDTDSVPTTSPAGPSESGVNRVCDTVITHPIKPGHAPSLSVCTTPIAAASHNIARQSQ
ERSARLRANVSPAAALGKLSNTQSSSSHSTVGEANPSNYSNVWSGASKPLSTSLTTRDSQ
REKVPSSISLTTRDREREKVPSSILLTTRDREREKVPSSPSLTTRDREREKVPSSTSLTT
RDSEREKVPSSTSLTTRDSEREKVPSSTSLTTRDSEKEKVPSSISLTTRDREREKVPLSI
SLTTRDREREKVPSSTSPTTRDREREKVPSSTSLTTRDSDREKVPSSTSPTTRDREREKV
PSSTSLTTRDSEREKVPSSTSLTTRDREREKVPSSTSLTTRDREREKVPSSISLKTRDSE
REKVPSSTSLTTRDSEREKVPSSTSLTTRDREREKVPSSTSLTTRDRERENVPSSISPTT
RDSEREKVPLSTSLTTRDSEREKVPSSTSLTTRDREREKVPSSTSLTTRDREREKVPLTS
LDLRLVQNNPNSPSLRTSGPKSVNNISTDSPLSSSSSRLRVNDKVQKTSSTAPKMKGLNI
KSKTKPQEQLSPKPARAESPSVLRKANNTSPLQSPKLQAKKVGSPLQTRNVDSPLLTRKA
AVTSSLKSKQQDRSSSSSSPATPITDGGQDNPTTTTTPEPISQSQSTTKMKVEEQRLHKE
VEQGILVVAKSKERPEPVQTTQRTFIEVRLSSSSPSSTPTPVLAPKEVVYSNDYSIPHTK
NVTQHKDQVNGNPVETSLWSGTPATPGSVCNLEKVNNTTSESAVNSIVLESVDGVPLPMS
NGPIDISHMNCSITETDETESLKANKSKLKAMERRSFSTDNSVSGDPNPFSVRQRIKSFE
NLASFDKPVLKCIDIQSFAQSYALTATLKPPLNRRLSGYMSGSVSSIDCRSLRRSFSSCI
DNFNALTPLTPMSPQLRKSPSSLTLTNFDLLTQSCSTSEAPLGHIQDQLGDGESPRISPG
VVTLTPQTPPVMRSRQARGHANLSRSRLRELRALSMPDLDKLCTDDFSSDPGTNATIKTA
LEIHPARPTEVVQNQTGGCSPPPNPTGMHPTRASWADTGASLDPIQRKTNCQQADIQNWS
ISLTVLAGSPVEQSKLQAVLASVTTKTDVLALLQEAKALSEDKDDTHFVVFSKEEGSGLG
FSIAGGMDLEQKSITVHRVFSKGVAGLEGTIQRGDSILSINGSSLEGTSHVEAVSCLHQA
RLSSQVLVVIRRGKDSEGQMSPRQHDLAHHTGRSYSLGCRENRPETTRSVMGLGVVEVGP
DGALRVELLKTSAGLGFSLEGGKASAHGDLPLNVKRVFKGGAAELSRVVDVGDEVLEVNG
RSLQGLMHYDAWSIIKAVSEGPVQLVIRKPRTSV
NT seq
9285 nt
NT seq
+upstream
nt +downstream
nt
atgcccatcacccaggagaacgccctgagccacatccatctactggaggactggctcctg
gtggcccagaccaggtacgaggaccactatggagacccagaccagcagtccaccaccagc
agagacccagaccaggactcgtaccaggagtcagaacacgaggaggatgcctgcagcacg
gtcggtggcagcacggtcggtggcagcacggtcaacagcggcggctgcagaggtaccaga
gaagacatgtctctatgccaggccgctacacagaagctgatggaatacattcagctcaac
ttcacagaggaaggagagatccagagcaccgccctccgacccacgacaccgtgtggaggt
gtggatgcggaggtgcgagccgtgtgcctcaccaagcgagagggggacggggcagagctg
ggactcagtttcggtaacatccctatattcggggatccggagggggaggacaggaagaag
ggaggagggagaaggaggaggaggaggaagggggatcagggacccgtgttggacgtgggg
tgtatctgggtaacggaggtgaggaagagaagtcccgcggcgaagtgcggtagaattaaa
ctacgagacgagctgctgtcactcaacggtcagctgatggtgggcgtcgacgtcacggga
gccagttacctggctgaccagtgctggaatggcggctgcatctacctgatcatgctccgg
aggatcaagcgtaaagcccctctccctccgtgcaatggaaacggcaatgccaccatcact
ggtggcagcggtggcatccaagatggccgaaactccctgcaccataggagcagcgtgtcc
tccgagcctcttccgacgcagaccggtggcagcaaacggacgcgaaagtttggcatcatc
gcccggtcgacgttcaatcgtgatagtaaagagctgggccctaagaacgacagctgggac
gatggcggtggggaaacgctggagaacggttaccgcggccacggagactctgcgatctcc
atggacacgagggtcacgcccccagagcctagtagctgcacaacttccatggacacgccc
ccagaggaggagccaagagaaccgaggactgttctgccccctctagcgatcccacatcat
ctgcagaacgggggaggaaccgccaccctgccgaatcgcttccacagaggactgtcagaa
cacaagacagaatctctcagcagtgatgcctcctgtcagcccagagagggaagtcgtatc
tggaagatgcacatggtgaaaggtcaggaggggctggggatccagattacgggaggacga
gggtccaagcgctcccctcacggcatcatcatagcgcacgtagaggagggaggcgccact
cagagggacggacgtctgaaggctggtgatgagctcctgatgatcaacggtcagtctctg
gtcggcctgtctcattcagaggctgtagacatcctacgctctaccgctggactggtacaa
ctggtcgtcgctagcagggaggagtctgaagttgatttccatcggtatccgtccaccagc
ctgccggacctggtcagtacctgcgcctcgtcttcctcctcctctgcttctcccagcgac
aatcaggagaacatggaacctcatcacaggcacggagtttgggaggacctcgcagccagc
agcctcagcctctctcggtctcgacctaccacactgactgatctggagaaggtagaggac
cgaggccgggtggagggacagaaagacacctgccgctctcccacatccatgaagttcagg
agcagatcacaagggggcggtagtcgtctggagtctgttggagaggatgacgagctgatt
gtggagaatggagaggcggggagtgacatggtggagaaaccgacacgaggtggacgcaaa
cactccctgcctcagcagttagacactgtaggcatccgacaggagtaccagatagttaag
aaatcagctcgctccctgagcacctttcaagtggagtctccatggcgactggcccagccg
tctattatatccaacatagtcctcatgaaaggacagggaaagggactggggttcagcatc
gtcggaggtcaggactctgcccgaggaaggatggggatctttgtcaagactatcttcccc
aacggagcagcagtcgcagacggacgactgaaagagggagatgagattctggaggtgaat
ggagactctctccagggcctgacccaccagcaggccatccagaccttcaagcagctgaaa
aagggtgtggtgactctaacagtacggacacgtctccgaagccccagcctgacgccgtgc
cccacccccacccttctcagccgctcctcctccccgaactccaacgccagcgggggcaac
cccaccccagtacccaccaccttcgacgaaccccccgaaacccgcaagggacccccaggt
cctggccccaaagaccgcatcatcatggaggttacactcaacaaagagccaggggtgggt
ctgggtatagggacctgctgtctaactctagagaacagtcctccagccatctacatccac
agtctggcccccggctctgtcgccaagatggatggacgactcagtcgaggggaccaagtc
ttggaggtggactctgtgagtctacgccatgtggccctgagtgaggcctatgctattctc
agtgagtgtggaccaggaccagtcagcctcatcatcagcagacaccccaaccccaaggtt
tcagagcaggagatggatgatgtaatcactaggtcttcacacagagacagtctgagtaag
gacggacacgcctctcaaactctaggcatgccttctaagagcccctccctcacagtgaag
gccaaacaggcagatggctcttccctcagctggaccatgaagaggttcctggagcccgcc
agcaggcaagggtctctgagttcggaggcggagctatctcagtacttttcccaggaagta
accagtcattcgtcgctgtcggaaaccactgcgatgggatccagtgatgacgacatgctc
caccacaggagctgtaacacctcaatagacgacacccccgccactcagccacatgggtta
aaagatgcctctggtgtaggagtggaggtcagcgtggaggtcagaacagatgataaggct
cccggtgtcccggtgttaaaccggccagtggagaccacccagcgccagaccagcgtgtgt
agtcctggtagcaactccgtccgcagtccactgctccgacagagacgagtcatctgccgt
gacgatgaggtcagcgatgatgaagatgctgttaccctgcccttccgccaggtcgctggt
cgtgttcccgccatgggggtggttgctgactctggcatcatgatctctacgtcatcagtg
gagttggacgaggagagtgaaggcccacatatcctgcttcatagtaattctctggagtca
caggaaggggtcggtttcgttccttcctccggcgcagaatcgcccttcatgcctatccgc
cagtcggaccaccaccagacccccgggggaggaggagggtctttccccacgacaggcccc
agtaacctgggtgtgaggatggactctcagggccccctggagcccaagcactcccctaag
ctggaacacaaggctgtgacacgcgtcaagagtatgctgagcatcgaggccccgcccatc
cagccaaccaatcagcagaaccagaaccagagaaccaaaggagaggagtctccgacctcc
tcatcctcccagtctctggcccctcagcctggggtaggttccagccactccctgggacgg
cctggttgtaaccccaacctcctctgtaagaagggcgaggcctgcagcgagttggcgggg
gaggagccagctcactgcaccatcgacaaggtggtcctgaggaggagtgaggaggagtcc
ttcggtctggacctggagatcagatcctctcctctgaaggtggtgatcactggattgagg
attggaggagcggccgagagagaatcccggggcaggatgtgtgtgggagacgagatcgtg
tcgattggggacacgcccacgtgctcctcgtcatatcacgacatctgtgagctcatgcac
aaccttcccgtgaccctcgcgctggaggtcaaaaggcccatgtcagctgtagatcgcctg
tccagcctcatgatgtcatcggggagttgtgatgtcatgggtccctccaatgggggggct
ccaaatccaggaagtccctcctcctcctcaccgaccaatcacaatcccaaacccacaacc
ccaatcaaccacaaccacagcaatgatataccggtcacctacattgatgacgtcatgacc
agactaagctcctccgatgtaaagagcgccctctcttccaataccctcaaagccccttca
gaagcacaacgtactgagcctatggcctgtaagtcagctgtagacagcaaggccctgcca
gagaatgagaaaagcagagttcagactcctccagcattgcccagtcaattggatttctct
gtcttggactctggaaagaaatgctgcctcatgcctgtgggtaaaacattcttgaacaat
tactccagaaactttagcagtaatctcacagacgagggaatgaacgctctttcaaatagg
gtggagagcgattcgaactgcaacatgtacgacatggttggcggcagtgattcggagagc
gaagacaccgccaccgacaacagccgtggcgctgccggcgataacaaaccggcgagccgc
agtgtcggcgctgagccccaggacacggattctgatgagaaggaagtggagatttgttac
agtgaggcccagcggcccagcactctgagtcaggcagcgctgactcacctaacagatggg
ccattgtctccacagctccatatctctatctctggctctgacggcagccacagtacaaag
gagactaggccctttgatgtagcactagactctgctgcttcctcctcctccactgtcact
actacttcagcggcctcccagcaaaacgaagactgctctgttgtaacaacccaatccaac
cccaatcagaaaccattcccctcactgtctcagggtctgcctgcctctggctctctatcc
tcaggtgcctttctggctgtggaggccaaaggttccccttgccaagaaatgccccgccag
tcttccaacgacacagattctgtgcccactacaagccctgcagggccttcagaaagtggt
gtcaacagggtttgtgacactgttataacacatccaataaaacccggccatgctccttca
ttaagcgtctgcactacccccattgcagcggctagccacaacatcgcgcgacagagtcag
gagaggtcagcccgactccgtgcaaacgtttcaccggctgcggctttaggaaaactatct
aacacacaatcgtcatcatcccactcaacggtgggggaggcaaatccctccaactatagc
aatgtctggtcaggcgcatctaaaccattgtcaacatcgctaacaacaagagacagtcag
agagagaaagttccctcgtcaatatcgctgacaacaagagacagggagagagagaaagtt
ccctcgtcaatattgctaacaacaagagacagggagagagagaaagttccctcgtcacca
tcgctaacaacaagagacagggagagagagaaagttccctcatcaacatcgctaacaaca
agagacagtgagagagagaaagttccctcatcaacatcgctaacaacaagagacagtgag
agagagaaagttccctcgtcaacatcgctaacaacaagagacagtgagaaagagaaagtt
ccctcgtcaatatcgctaacaacaagagacagggagagagagaaagttcccttgtcaata
tcgctaacaacaagagacagggagagagagaaagttccctcgtcgacatcgccaacaaca
agagacagggagagagagaaagttccctcgtcaacatcgctaacaacaagagacagtgat
agagagaaggttccctcgtcaacatcgccaacaacaagagacagggagagagagaaagtt
ccctcgtcaacatcgctaacaacaagagacagtgagagagagaaagttccctcgtcaaca
tcgctaacaacaagagacagggagagagagaaagttccctcgtcaacatcgctaacaaca
agagacagggagagagagaaagttccttcgtcaatatcgctaaaaacaagagacagtgag
agagagaaagttccctcgtcaacatcgctaacaacaagagacagtgagagagagaaagtt
ccctcgtcaacatcgctaacaacaagagacagggagagagagaaagttccctcgtcaaca
tcgctaacaacaagagacagggagagagagaacgttccctcgtcaatatcgccaacaaca
agagacagtgagagagagaaagttcccttgtcaacatcgctaacaacaagagacagtgag
agagagaaagttccctcgtcaacatcgctaacaacaagagacagggagagagagaaagtt
ccctcgtcaacatcgctaacaacaagagacagggagagagagaaagttcccttaacatcc
ctggacctcaggttggtccagaataaccctaatagtccctctctcaggacatccggtccc
aaatcagtcaacaacatttcaacagacagtcctctatccagcagtagcagcaggctcaga
gtcaatgacaaagtccagaagaccagcagcactgcacccaaaatgaaggggctcaacatc
aagagtaaaaccaaaccccaggagcaactttccccaaaaccagccagagcagaaagtccg
tcggttctgaggaaagccaacaacacttctccgctccagtcccccaaactgcaagccaag
aaggtgggctccccactgcaaaccaggaacgtggattcccctctgcttaccagaaaggca
gccgtaaccagcagcctaaaaagtaaacagcaagaccggagcagcagtagtagtagccct
gccacacccataacagatggaggccaggacaaccccacaaccactactacgccagaacca
atcagccaatcacaatcaactaccaagatgaaggtagaggagcaacgtctacacaaagag
gtggagcaagggattttggtggtggccaagtcaaaagaacgaccagagccagtccaaact
acccagaggaccttcatcgaggtgcgactctcatcctcatctccctcctccacgcctaca
ccagttctggcaccaaaggaagttgtgtattcaaacgattactcaattcctcataccaaa
aatgttactcaacacaaggatcaggtcaatggaaatccagtagagaccagtctatggtca
ggaacccctgcaacccctggctcggtgtgtaatcttgaaaaagtcaacaacactaccagt
gaatcagcagtgaactcaatagtcctagaatccgtagatggggttcctttgcctatgagc
aatggtcccatagacatctctcacatgaactgtagtataacagagacggatgaaactgag
agcctcaaagcaaacaagtccaaactgaaggcgatggagcgtcgtagtttctccacagac
aacagcgtctcaggggacccaaaccccttctctgtccgccagaggatcaagtcctttgag
aacctggccagcttcgacaagccagtgctcaaatgcatcgacatccagtcctttgctcag
tcctatgctctgacagcaacgttgaagccgcctctcaaccggagactgtctggctacatg
tctggatcggtaagctccatagactgtcgttcgctacgaaggagcttcagttcgtgcatc
gacaacttcaacgcattaacccccttgaccccaatgtcgcctcagcttcgcaagtcaccg
tcgagcctgaccctcacaaactttgacctgttgacgcaaagctgcagcactagcgaagct
cccctcggacatatccaggaccaacttggagatggagaaagtcccagaatctccccagga
gttgtaaccctaacccctcagacgcctccggtgatgcggagtcgccaggcccgaggtcat
gccaacctgtcccggtccagactgagggagctcagggcccttagcatgcccgacctggac
aagctctgcaccgatgacttctccagcgacccagggaccaacgccaccattaagacggcg
ctggagatacacccagccaggcccacagaggtcgttcagaaccaaacagggggctgttcc
ccgcctcctaaccccaccgggatgcacccgaccagggccagctgggcggataccggggcc
agcctggaccccattcagaggaaaaccaactgtcagcaggcagatattcagaactggtcc
atcagtttgacagtgctggctggctctccggtggagcagagtaagctgcaggcggtcctg
gcctccgtgaccaccaagacagacgtgttggcactgctacaggaggccaaggctctctct
gaggataaagatgatacccactttgtagtcttctctaaagaagagggatccggacttggt
ttcagcatcgctggtggaatggaccttgagcagaagtccataactgtccatcgggtgttc
tctaaaggcgtggccggcctggaaggaaccattcagcggggggacagtatcctgtccatc
aacggcagcagcttggaggggacgtcccacgtagaagccgtgtcctgtctccaccaggct
agactgtcctctcaggtcctggtggttattcgcagggggaaggacagtgaaggacagatg
tccccgagacaacatgacctggcccaccacaccggaagaagctactccctgggatgcaga
gagaaccggcctgagacgactagatctgttatgggactgggagtggtggaggtgggtcct
gacggggctctgagggtggagctgctgaagacgtcagctggtctgggcttcagtctggag
gggggcaaagcctcggcacacggagacctacccctcaacgttaaacgagtcttcaaaggt
ggtgctgcggagctgtcgagggtggtggacgtgggggacgaggtactggaggtcaacgga
cgctcgctgcagggcctcatgcattacgacgcctggagcatcatcaaggccgtgagcgaa
ggccccgtgcagctggtcatcaggaaaccgcggacctctgtatga
DBGET
integrated database retrieval system
