Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139389992
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Entry
139389992 CDS
T10872
Name
(RefSeq) PHD finger protein 19-like
KO
K11486
PHD finger protein 19
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
139389992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139389992
03036 Chromosome and associated proteins [BR:
ocla03036
]
139389992
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
139389992
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
139389992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mtf2_C
Tudor_2
PHD
PHD_2
Prok-RING_1
DUF4537
PHD_ash2p_like
C1_1
PHDvar_NSD
Chromo
DUF3408
Motif
Other DBs
NCBI-GeneID:
139389992
NCBI-ProteinID:
XP_070993159
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All DBs
Position
30:6741054..6774554
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AA seq
565 aa
AA seq
DB search
MLESAYRDDFCSVEPKKGLDAKRLPQKRERSFTDLESSLTVGQYVLCRWSDGLYYLGKVQ
RVSASKQSCFVTFEDNSKFWVLWKDIQHAGVPGEEPKCSVCSEMVLVSDNEILICGKCGI
GYHQQCHLPEVESSMDLSPWFCRRCIFALAVRKGGALKKGAIAKALQAMKQVLTYNPAEL
EWDSQHRTNHQQCYCYCGGPGEWYLKMLQCFRCQQWFHEACIQCLQESMMFGDRFYLFIC
SVCNKGLEYIKRLALRWVDVVHLALYNLGVQSKKKYFELEEILNFVSNNWEHFHLGKLSN
TPPTERGQYLLDALNNYKSKFLCGKEIKKRKCIFRLRTRVPPNPPSKLFPERAQNEGWRG
RKKGPDRNSSLPAEKRRKKRSKWLLEDAIPNNDLTSAWSTNHHMANIFDFTLDELQSLKS
TSSGRTFSLDLDSTDAASTSGSATTSVSYDFRKNVGSRKRKLPTSNYTVLATKKEVVESE
LSPMELSLPGEEAASAMLDNAIDSHTFDSISEDDSSLSHLKSSITNYFGAAGRLTCGEKY
QVLARRVTPEGKVQYLVEWEGTTPY
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgttggagtcagcatacagagatgacttctgcagtgtggagccgaagaaggggctggat
gccaagcgtctaccccagaagagggagcggagcttcacagacctggaaagcagcctgacc
gtgggccagtatgtcctgtgtcgatggtctgatggcctatactacctagggaaggtccag
agagtgagtgcctccaagcagagttgctttgtcacttttgaagataattcaaaattctgg
gttctctggaaagacatccaacatgctggagttccgggggaggaacccaaatgctcggtt
tgttctgaaatggtgctggtgtctgacaatgagatcctgatatgtgggaaatgtggaata
ggttaccaccagcagtgccacctgccagaggtggagagctcaatggatttgtcaccatgg
ttttgcaggaggtgcatctttgctttagctgtgcggaaagggggagctctcaaaaagggc
gctatagcaaaagcactgcaggccatgaagcaggtgcttacctacaacccagcagagctg
gagtgggattctcagcaccgcacaaatcaccaacagtgttattgctactgtggaggacct
ggagagtggtacttgaagatgctgcagtgttttcggtgtcaacagtggttccatgaggcc
tgtatccagtgcctacaggagtccatgatgtttggagataggttttacttgttcatctgt
tccgtgtgtaataaaggactggagtacattaagcgcctagctctccgatgggtggacgtg
gtgcacttggcactttacaacctgggagtccagagtaagaagaagtactttgagctggag
gagatccttaactttgtcagcaacaactgggagcatttccatttgggcaagctctccaat
actcctccaacagaaagaggccaatatctccttgatgctctgaacaactacaagagcaag
tttctctgcgggaaggagatcaagaagaggaaatgcatcttccgcctgaggacacgcgtt
ccaccgaaccctccctccaaactctttcctgagagggcccaaaacgagggatggagagga
cgaaagaaaggcccagacaggaacagctctctcccggcagagaagaggaggaagaaaagg
tcgaaatggctgctggaggacgccattcccaataatgacctgacctcagcctggagcacc
aaccatcatatggccaacatctttgacttcacattggacgagttacaaagcctcaaaagc
actagctcgggacggaccttcagtcttgacctggactccacagacgctgccagcacctct
gggtccgccaccaccagtgtctcctacgacttcaggaagaatgttggcagtcgtaagagg
aagctgcccacctctaactatacggtgctggccactaagaaggaggtggtggagagcgag
ctgagccccatggagctgagtctaccaggagaggaggctgcctccgcgatgctggacaac
gcgatcgacagccacacctttgacagcatcagcgaggacgactcctccctctcccatctc
aagtcgtccatcaccaactactttggggcggcggggcggctcacctgcggagagaagtac
caggtgctggcccgccgggtcactccagaggggaaggtgcagtatctggttgaatgggag
ggcaccactccctactga
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