Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139390022
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Entry
139390022 CDS
T10872
Name
(RefSeq) PDZ and LIM domain protein 2-like isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
139390022
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
139390022
Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
139390022
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GFIT
Motif
Pfam:
PDZ
DUF4749
PDZ_6
LIM
PDZ_2
Ogr_Delta
Motif
Other DBs
NCBI-GeneID:
139390022
NCBI-ProteinID:
XP_070993228
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Position
30:complement(18114415..18173615)
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AA seq
367 aa
AA seq
DB search
MALTVNLIGPSPWGFRIYGGRDFKKAITISKVNGGSKAELAALQPGDVILEINGENTVDM
LNVEAQNKIKNSKTQLQLLVKRPEPPSPEQTNGTTTPEKLTGRFQEAVLVSRDENQNYRE
YSISSPASLSPGPYSPEPPSSPEGKRESTKSIQLCSWSPEEKTSSYKLSRPLSQEFSSSD
FRSNSVSSRTPTPPGCYSPHSPVDCELSVSPRRSSSSSDFTMQRFDRDSEVYKMIQENKE
SRTAPRQSNTFRMLQEVLEADEKEAAVRFPGLSPKTTPPKPTSPGGGVPKYHTCEKCGIS
IVTQAVRIMDDRFRHPECYTCSTPECGLNLKMRGHFWVGEEMFCEKHAHENYQGLGTAPR
ATISPRH
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgacagtgaacctgattggtccgtctccatgggggtttagaatatacggagga
agggacttcaagaaggcgataaccatttccaaggtcaacgggggcagcaaagccgagctg
gctgccctgcagcctggtgatgtcatcctggagatcaatggagagaacacagtggacatg
ctcaatgtggaggcccagaacaagatcaaaaactccaagactcaactgcagctgctggtg
aagaggcctgagccccccagccctgaacagaccaatggaactaccaccccagaaaagctc
actggacgcttccaggaagcagtgctggtgagtcgagatgagaaccagaactacagagag
tactccatctccagcccagcctccctgtcacctggaccctactcacctgagcccccttcc
agccctgaggggaaaagagagagcaccaagagcatccagctgtgttcgtggtctccagaa
gagaagacgtctagttacaagctgtccagaccactgtcacaggagttctcctcttcagac
ttcaggagtaactctgtgtccagtcgaacgcccacccctccaggatgctactcgccccac
agccctgtcgactgcgagctgtctgtctcccccaggcgcagcagttccagctctgacttt
accatgcagaggtttgaccgggattcagaggtctacaagatgatccaggagaacaaggag
tctcgcacggctcctcgacagtccaacaccttccgcatgctacaggaggttctggaggcc
gatgagaaggaggcagctgtgcggttcccagggctctcccccaaaaccacccccccaaaa
ccaacatctcccgggggtggagtccccaagtaccacacctgtgagaagtgtggcatcagc
attgttacacaggcggtgcgcatcatggacgaccgcttccgccacccagagtgctacacc
tgttctacaccagagtgcggtctcaacctgaagatgcgaggtcacttctgggtgggagag
gagatgttctgtgagaagcatgcccacgagaattaccagggcctgggcactgccccacgt
gccaccatctcgccccgccactga
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