Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139390059
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Entry
139390059 CDS
T10872
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM36-like isoform X1
KO
K12013
tripartite motif-containing protein 36 [EC:
2.3.2.27
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Enzymes [BR:
ocla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139390059
Membrane trafficking [BR:
ocla04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
139390059
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
139390059
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139390059
NCBI-ProteinID:
XP_070993274
LinkDB
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Position
30:1322388..1346005
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AA seq
762 aa
AA seq
DB search
MSDTADTEENQGMLPSLVDQIVQRITAGEVPIKNIERELICPICKELFTHPLILPCQHSV
CHKCVRELLLLNHEDSFDAGSECSLPGSPGPRSRVPSPSMERLDRLARSATLQRRSFGRR
GSMSSPGWRRGSVTPRITTFPCPGCQHDVDLGERGMSMLFRNFTLESIVERYRQAARAAV
AIMCNMCKPPQQEATKSCMDCKASYCNECFKFHHPWGTPKAQHEYVGPTMNFRPKVLMCP
EHEMEKVNMYCEVCRRPVCHLCKLGGSHANHKVTTMSSAYKILKEKLSKAIHYLISKEDQ
VKTQISHLEVLINETEEKGQLAERRTDENFERLFETLQERKFEMLRSIEQSRTRRLDQLR
GQVDEYQGMLENSGLVGYAQEVLKETDQSCFVQTAKQLHTRIAKSTESLRTFHPVADPSF
DEFVLDTSREETLLKELCFGGVPDPPIIDLSRSRVYNEGLVCWQLAEDTLATDHQVLEYR
KLGVEQDEEEGGSRWRPTVPVYGPSTVVCDLEANSLYSFRVRSCRNSVYSPYSPEVTFHT
PPAPVFGFLFNDKCGFSSERLTLSKLRDSVESAAGMAFLLAAERVQTGSYMGLDYIIGDT
GISQGRHYWAFRVEPHSYLVKVGVASDSKLLEWIHNPRDTSSPRYDHDSGHDSGSEDTCY
DLSQPFTLLTVGMGKVFIPKASISSATAGNDHGNRVLPMPQRIGVYLDYEAGRVYFYDAN
TMRCLYERQVDCTGTMYPAFGLMGSGKVQLEEFIAAKRLSYM
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatactgcggataccgaagaaaatcagggtatgttaccgagtttggtcgaccag
atagtccagcgaataacagccggagaggtccctatcaagaatattgagcgcgaactaatt
tgtccgatctgcaaggagctgtttacacaccccctcatcttgccctgtcagcacagcgtt
tgtcacaagtgtgtccgagagctgctgctattgaaccatgaggattctttcgatgcaggc
tcggagtgttccctccctgggagcccagggccccgatccagagtgccctcgccaagcatg
gagaggctggataggcttgcaagatcagccacactgcagagaaggtcgtttgggaggaga
ggctctatgtcctcaccaggatggaggcgtggctctgtgaccccccgcatcaccactttc
ccatgcccgggttgccaacacgacgtggacctgggcgagcggggcatgagcatgctcttc
cggaacttcaccctggagagcatcgtggagcgctaccggcaggcggcccgcgctgctgtt
gcgatcatgtgcaacatgtgcaagccgccccagcaggaggctaccaagagctgcatggat
tgcaaggccagctactgcaatgagtgcttcaagttccaccacccctggggcacccccaaa
gcccagcacgaatacgtgggtcccaccatgaactttaggcccaaggtgctgatgtgtccg
gagcatgagatggagaaggtcaacatgtactgcgaggtgtgccggcgtccagtctgtcac
ctgtgcaagctgggaggctcccacgccaaccacaaagtcacaaccatgagcagcgcctac
aagatcctcaaggagaagctatcaaaggctatccattacttaatcagcaaagaggaccaa
gtgaagactcagatttcccacctggaggtgttgatcaatgaaaccgaggagaaaggccag
ttggcggagcgtcggaccgacgagaactttgagcgactgttcgagaccctccaggagagg
aagtttgagatgctgcggtccatcgagcagtcgaggacgcggcgtctggaccagcttcgg
ggccaggtggacgagtaccagggcatgttggagaacagcggcctggtgggttatgcccag
gaggttctcaaggagacggaccagtcctgctttgttcagactgccaagcagctgcacacc
aggattgcgaaatccaccgagtctctgaggacattccaccctgtggccgacccctccttt
gatgagtttgtgctggacacttccagagaggagaccctgctgaaggagctttgttttggt
ggagtccctgaccctcccatcatcgatctgtcccgcagtcgcgtctacaacgaaggcctg
gtgtgctggcagttggctgaggataccctggccacagaccaccaggtgcttgagtacagg
aagctgggtgttgagcaggacgaggaggagggcggcagccgctggcgccccacagtcccg
gtgtacggccccagcacagtagtgtgcgacctggaggccaacagcctctactcgttcaga
gtacgcagctgccgcaactccgtctacagcccctacagcccagaagtcaccttccacaca
ccacctgctccagtgtttggcttcctgttcaatgacaagtgcggcttcagctcggagcgg
ctgacattgagtaagctgcgtgactcggtggagagtgcggccggcatggccttcctgctg
gctgctgagcgcgtgcagacaggcagctacatgggcctggactacatcatcggtgacaca
ggcatctctcagggcagacactactgggccttccgcgtggagccccactcctacttagtc
aaggtgggcgtggcctctgattccaagctgctggagtggatccacaacccccgggacact
agtagccccaggtacgaccatgacagtgggcacgacagtggcagcgaggacacgtgctac
gacctgtcccagcccttcaccctgctcaccgtgggcatgggcaaagtgttcatccccaaa
gcatccatctcctccgccaccgccggcaatgaccacggcaaccgggtgctgcccatgccc
cagcgcattggcgtgtacctggactacgaggcgggccgtgtctacttctacgatgcaaac
accatgagatgcctttacgagcggcaggtggactgcaccggtaccatgtatcccgcgttt
ggcctcatgggtagtggcaaggtccagctagaggagttcatcgcagcaaagcgactgtcg
tatatgtga
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