Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139390108
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Entry
139390108 CDS
T10872
Name
(RefSeq) amyloid-beta A4 precursor protein-binding family A member 1-like
KO
K04531
amyloid beta A4 precursor protein-binding family A member 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139390108
Membrane trafficking [BR:
ocla04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
139390108
Endocytosis
Clathrin-mediated endocytosis
LDLR adaptor proteins
139390108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PID
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
139390108
NCBI-ProteinID:
XP_070993366
LinkDB
All DBs
Position
30:complement(37883510..38009490)
Genome browser
AA seq
1049 aa
AA seq
DB search
MNPQEAELGQELSEDVEADLPPPQRRRHDNNTATNSRRPRQPSNHSSENNNHAAPRYRRY
NEAPGAGVSRIRGAPQRRSTEEPEAELHQGAQSPPQQPQPQPQQAQGQSLPIPRPAVTRY
RRQEDSEARLRAQQQRHTQRQQREAERAQQQQPPPPGPQPVHSLPPQPDEPEEQPPPPGP
QPVHSLLPQPDEPEEYEGEREREREGDDYALARSASTESGFHTHTDRAEGDAVMALDPEA
EDDCGTYEVTLRPEAEGYTESAESEQQHPHPNLNLNYPPLPPPLPREPLPDVGRPPSQEE
AEETLNPGGGYSNYVYTQPLYRRGGGASRKGGRDSSVEEGVEPEDEAYSEAYDYSLTEHV
YEEIGDALSSAAKVAEPMDANENLQQRKAGFHLFEGREGGGDYRQQEAVGSRLHHYDERS
DGESDSPEKEAEFAPYPRADSCDQDGEEDIDMIVAEVRESLSSQSLERAAAGLREGGEEE
DMMEGGEEEEGEWPESEHAHNSQSDAPTDSTYRKGEIEGEGDESEEESFPPPAESDDWSG
VRNSREKRDAISLAIKDIKEAIEEVKTRTVRSPYTPDEPKEPIWVMRQDLSPTAECCDLQ
PSLGGDSPGSDSQASPQGAESSVRTPMLEGSDSFESPPPSTKESRRSLASFPTYVEVPGP
CDPEDLIDGIIFAANYLGSTQLLSDKTPSKNVRMMQAQEAVSHIKTAQKLAKNKMKTPEG
EAQPMTEVDLFISTQRIKVLNADSQETMMDHTLRTISYIADIGNIVVLMARRRMPRPDST
DSVEVSEPDQEEKQSQYKMICHVFESEDAQLIAQSIGQAFSVAYQEFLRANGINPEDLSQ
REYSDLLNTQDMYNDDLIHFSKSENCKDVYIEKQKGDILGVVIVESGWGSILPTVIIANM
MHAGPSEKSGRLNIGDQIMSINGTSLVGLPLSTCQTIIKGLKNQSRIKLNIVRCPPVTTV
LIRRPDLRYQLGFSVQNGIICSLMRGGIAERGGVRVGHRIIEINSQSVVATPHEKIVHIL
SNAVGEIHMKTMPAAMYRLLTAQEQPVYI
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgaacccccaggaggcggagttaggccaggaactgagcgaggacgtggaagccgacttg
ccccctcctcaacgccgtcgccatgacaacaatactgccacaaacagcaggcgaccccgg
cagcctagcaaccatagtagtgaaaacaacaaccacgctgctccgcgctaccggaggtat
aatgaggcccctggtgcaggtgtcagcagaatcagaggagccccacagcggaggtcaaca
gaggagccagaggcagagctgcaccagggggcccagtctcctccccagcagccccagcct
cagccccagcaggcccagggtcagtctctgcccatcccgcgacctgcagtgacacgttac
cgcagacaggaggacagtgaggccaggctcagagcacagcagcagagacacacacagaga
cagcagagagaggctgagagggcccagcaacaacaaccacctccaccaggcccacagcct
gttcactctctacccccacaaccagatgagccggaggaacaaccacctccaccaggccca
cagcctgttcactctctactcccacaaccagatgagccggaggagtatgagggggagaga
gagagggagagagagggtgatgattatgcattagctcgttctgctagcacagaaagcggt
ttccacacacacacagaccgggcagagggcgacgccgtcatggcactagatcctgaggca
gaggacgactgcggtacctacgaggtgacgcttcgcccagaggcagagggatacacagag
agtgctgagtcagagcaacaacacccccaccccaacctgaacctcaactacccccctctg
ccccctcccttaccccgggaacccctaccagatgttgggagaccccccagtcaggaggag
gcagaggagaccctgaaccctggaggaggttactccaactacgtgtacacccagcctctc
taccgccgtgggggaggggccagcagaaaaggggggcgggacagcagcgtggaggaaggg
gtggagccagaagacgaggcgtattctgaagcctacgactactccctgacagaacacgtc
tacgaggagatcggcgacgctctctcttctgccgcaaaggttgcagagcctatggacgcc
aatgagaacctccagcagaggaaggcggggttccatctgtttgaggggcgggaaggaggc
ggggactaccgacagcaggaggcggtggggtcacggctccaccactacgatgaacgctcg
gacggggagtcggacagcccggagaaggaggcggagtttgctccgtacccacgggcagac
agttgcgaccaggacggggaagaggacatcgacatgatcgtagccgaggtcagagagagt
ctcagctctcagagtctggaaagagctgctgccgggctacgggagggaggagaggaagag
gacatgatggaaggaggagaggaagaggagggagagtggcccgaatccgaacacgctcac
aattctcaatccgatgcgcccacagactccacataccgcaagggagagatagaaggagag
ggagatgagagtgaagaagagagcttcccacccccagcagaatctgacgactggtctggg
gttcgtaacagtcgtgaaaagagagacgccatctccctggccataaaggacatcaaggag
gccatagaagaggtgaagaccaggacggtgaggtcaccctatacccctgatgaacctaaa
gagcccatctgggtgatgagacaggacctgagccccaccgctgagtgctgtgacctgcag
ccctcactaggtggcgactctccaggctcagactctcaggcctctcctcagggggcggag
tcttctgtccgaacgcccatgctcgaggggagtgacagcttcgagtctccaccgccctcc
actaaagagtccaggagaagcctcgcctccttccctacctatgtagaagtcccaggtccg
tgtgacccagaggacctgatcgatgggatcatatttgctgctaactacctgggctccacc
cagctgctgtctgacaagacgccctcaaagaacgtccgtatgatgcaggcccaggaggcc
gtcagccacatcaagacggcccagaaattagccaaaaacaagatgaagactccagaggga
gaggcccagcccatgacagaggtggatctcttcatctccacccagaggatcaaagtcctc
aatgctgactcacaggagaccatgatggatcacaccctgaggaccatctcctacatcgct
gacatcggcaacatcgtggttctgatggcgagacgccgcatgccccgcccagactcaacg
gacagtgtggaggtgtctgaacctgaccaggaggagaaacaaagccagtacaagatgatt
tgtcatgttttcgagtcggaggatgcccagctgatagcccagtctataggccaggccttc
agtgtggcgtaccaggagttcttgagggccaatggcatcaacccagaggatctgagtcag
agagaatacagtgatctgctcaacactcaggacatgtacaatgatgacctcatacacttc
tccaagtctgagaactgcaaagatgtttacattgagaagcagaagggtgacattctgggc
gtggtgattgtggagagtgggtggggctccatcctgcccacagtcatcatcgccaacatg
atgcatgctggtccatctgagaagtctggtcgtctgaacatcggagaccagatcatgtct
atcaacgggaccagtctggtaggactacccctgtctacctgccagactatcattaagggt
ctgaagaaccagtctcgtatcaagctgaacatcgtaaggtgtcctcccgtaaccacggtg
ctcatcagacgacctgacctcagataccagctaggcttcagcgtacagaatggcattatc
tgcagccttatgcgagggggcatcgctgagaggggaggagtcagggttggccaccgcatc
atcgagatcaacagccagagcgtagtggccacaccccacgagaagattgtccacatcctg
tccaacgcagtgggagagatccacatgaagacgatgccagctgccatgtaccgcttgcta
actgcccaggagcaacccgtttacatctag
DBGET
integrated database retrieval system
