Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139390129
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Entry
139390129 CDS
T10872
Name
(RefSeq) nuclear receptor corepressor 2-like isoform X1
KO
K06065
nuclear receptor co-repressor 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
139390129
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocla03036
]
139390129
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
139390129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
PRP38_assoc
DUF4820
DnaT
Motif
Other DBs
NCBI-GeneID:
139390129
NCBI-ProteinID:
XP_070993399
LinkDB
All DBs
Position
30:complement(14314078..14443911)
Genome browser
AA seq
2478 aa
AA seq
DB search
MSSHPQSVPQGRRAVDTRHLPNPASLPLQLARAHTDVGLADYHPHSRDYSSHLAQPHRRR
PSLLSEFQPGNERGQEQHIRYEHIYLPDPNSLSEVEYAEMKRPRLDMGAESLMRHSAHRP
QLPLGGAEDMSKDRGSSMGKLEPISPVSPAQMDPDLDLVPARFSKEELIQNMDRVDREIT
MVEQQICKLRKKQVQQQLEEEAAKPQEPERSMISPPPSEAKHRSLVQIIYDENRKKAEEA
HWILEGLGPRVELPLYNQPSDTKQYHENIKINQAMRKKLILYFKRRNHARKQWEQKFCQR
YDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRKQRELQERMQSSRVGQRGGG
LASSSARSEHEVSEIIDGISEQENTEKQMRQLAVIPPMLFDAEQQRIKFINMNGLMDDPM
KVYKDRQVMNMWSEQEKDTFREKFIQHPKNFGLIASFLERKTVAESVLFYYLTKKNENYK
NIVRRNYRRRGRSQHGQQQQQQLQVNRSSQEEKEKEKEKEKEKEEKEKEKEKEKEKEKEK
EKEGEKDEEKTEGEDKEDVMKDDTSGEDGEDKEPTVAFKGRRTANSQGRRKGRVTRSMTS
EVEETATPPLGSELANLEMNESSRWTEEEMETAKKGLLQYGRNWSAIAKMVGSKTVSQCK
NFYFNYKKRQKLDEILQQHKMKSERERKARRKGKALQSEEASAPSAAEEEEMEGSGASGN
EEEAPEDGEGGANNSSDTESLPSPRSSEDSKAKEEGGARAKASSKPVDKDASASHMVQGG
DEKPPGDGDKTIKQEVKTEAGEGSKELPSESTDGDRKPPTAEAEESKSSSKSSKRDHEPK
TGSHADSDSSATCSADEVEESENTEKNRMTSPNRPSLLNYAHDGVISSPLQKPMDLKQLK
QRAAAIPPIMPQIPEGGPRGGVGKAVLPPHALALYQQQITMAHGESSQEAKQQQHAGQPS
KQHPYPAQGDRDPHNISSPRVRPRSPSTSDKDELEGNERWLQTLLHGLHKSRAFSPHGDP
KKQAVGPEDLRATTLGRPVMSPYPMSPRDMAKLSHDQHLLHYNSSFQQVGHSGPPGLQQD
GIRLAAVRPLHMPEPPPLISSNKPGGSITQGTPVQLHSPAHGMDHGKMPPVQMGLSWMDQ
RKVGESKCLEWVQHSQPWFAGPYPVVKQEQLSPRCSSSQAENLSTQGAPHDANAGRGSMP
AVQGGSITKGIPGTRVHQDSPISYRGGSITQGTPADVLYKGTITRLITEDNPSRAERERD
EALSKGHVVYEGISGHILTYDRLPSQNPKEDGRGQPGEILGLKRPYDVMEGGISRGLPMR
DSLSAANCEGLMGRAMPHERDSPHPTHHIRGSISQGIPRHLEPQDGYMRREPKQMKREGS
PPRGPSQMADPMKGRDGMVPTVKEGGRSIHLIPREELRQMPEGMMMAKAGKDGIIAQGAP
MKQEQGGLRKGHDVRSIIASSPRSHYSMPPHLEMRGPEQRGRYEEGPKGRPSAVVSTASS
MARSSPLAMGGDQGGKAHHSPVGYEEHKGGMRAPYTGPSHRGSPLSRESGQRQHEGSNKN
QPQERKSTPTPREMSSGKSPLSGVAEQQAQQQAQQQASLASYERLLQGLGADVYRGQIPL
AFDPAALRQGIPIDPAAYYLPRHLAPNPGYPHPYPYLIRGFPDTAALENRQTLLNDYITS
QQMHQWPAAAAMAAQRSDLLRGLSPRDQPLQLPYSAAPRGIIDLSQVPHLPVLVPPSAGS
SGSPMDRITYIPGAFPSQPYTSSPISPVGPQHMSKQHGTPSSADRERERDRERDRERERE
RDRERDREQERERERDRERQRDRDRERERERDRDREKGISHGNVEHAPIWRPGTEHSSGG
SVRPSSHSGYGHQHSPVSPRTQDSVQQRPSVLHNTGGKSLPVSDHNNPSVLRSMPGSNRY
PGYAYQQSMDSKEMGRDGGKSRGGLPKHTQDQHGPSISSSKSDPKLASPNQGGYPSPYPQ
GSSASHHSGRPPHLLPPQSDNAAGRGESGTPSREKTQNKPMSVQEQELRALGKTTMTAAN
FINAIIMRQISCETGMPETGSLVANSASDVQQKMMPMEQHGLYRPPSEERLSPGQQPQSP
LVKGSQRVVTLAQHISEVITKDYTRQSQQAQQQVPMQQSYHSNSVLDLTRPPSAPQAPPA
SQEPSQGPRYTPEGAGGDRARDRSPPQPKVSPVNMSTDGIEPVSPAGAMSEPETQGASYP
NEQGMGSRSPPSTSQPPAFFSKLTESTSAIVKSKKQEMIKKMTVVGSDADFNPGQPGTEI
FNMPASTTAGPVSIRSHPAPEVSGNTIGLEAIIRKALMGKYDEQAEERPPSSNAINPMVA
SVPAAMLPADGRTEDSYSLQGGGKPKGSGRSNGRKAKSPGPGLSGGERPSSVSSVHSEGD
ANRRTPVTNRVWEDRPSSTGATPFPCNPLTMRFPSGMPVSNPSPTPSGQIGAQGQGRSWE
EEPKPLLCSQYETLSDSE
NT seq
7437 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcccacccccagtctgtgcctcagggccggagggctgtggacacacgccacctg
ccaaaccctgccagtctaccactgcagctggcacgggcacacacggatgtgggattggcg
gactatcaccctcactctcgggactacagctcccacctggctcagccccaccgccgcaga
ccctctctactgtccgagttccagccagggaatgagagaggtcaggagcaacatatccgc
tatgagcacatatacctgcccgatcccaacagcctatcagaggtggaatatgctgagatg
aagcgtcctcggctggacatgggggcggagtctctcatgaggcactcagcccaccgccca
caacttcctctgggaggggcagaggacatgtcaaaggaccggggcagctccatggggaag
ctggagccaatctcccccgtcagcccggcccagatggaccctgatctggacctggtgccc
gctcgcttctccaaggaggagctcatccagaacatggatcgtgtggaccgggagattaca
atggtggagcaacagatctgcaagctacgcaagaaacaggtacagcaacagctggaggag
gaggcagcaaagccccaggagccggagcggtccatgatctcccctccgcccagcgaggcc
aagcaccgtagcctggtgcagataatctacgacgaaaacaggaaaaaggcagaggaagct
cactggattctggaaggactgggaccccgagtagaactgcctctgtacaaccagccctcc
gataccaagcagtaccatgagaacatcaaaataaaccaggcgatgaggaagaagctcatt
ctttacttcaagaggagaaatcatgctcgtaagcagtgggaacagaagttctgccagcgc
tatgaccagttgatggaggcctgggagaagaaggtggagcgcattgagaacaacccccgg
cgccgggccaaggagagcaaggtgcgcgagtactacgagaaacagttccctgagatccgc
aagcagagggagctgcaggagcgcatgcagagtagccgggtggggcagcgtggaggggga
ttggcctcgtcttcagcccgcagtgaacacgaggtctctgagatcatcgacggcatatca
gagcaagagaacaccgagaagcaaatgcgtcagctggcggtcatccctcccatgctattt
gacgcagagcagcaacgtatcaagttcatcaacatgaacggcctgatggacgaccccatg
aaggtgtacaaggaccggcaggtcatgaacatgtggagcgagcaggagaaggacaccttc
cgtgagaagttcatccagcacccaaaaaactttggcctgattgcttctttcctggagaga
aagacggtggcagagagtgtcctcttctactacctgaccaaaaagaacgagaactacaag
aacattgtgcgcaggaactatcggcgccgtggcaggagccagcatggccagcagcagcaa
caacaactgcaggtgaaccgcagcagccaggaggagaaggagaaggagaaggagaaggag
aaggagaaggaggagaaggagaaggagaaggagaaggagaaggagaaggagaaagagaaa
gagaaggagggagagaaggatgaggagaagacggagggggaagacaaggaggatgtaatg
aaggacgacacctccggcgaggacggggaggacaaagagcccacggtggctttcaagggt
cgacgcacggccaacagccagggccggcgcaagggccgcgtcacccgctccatgaccagt
gaggtggaggagaccgccactccaccgctcggcagcgaactcgccaatctggagatgaat
gagagctctcgctggactgaagaggagatggaaaccgccaaaaaaggtcttctccagtat
ggtaggaattggtcagccatcgccaagatggttggctccaaaactgtgtcacagtgcaag
aacttctacttcaactacaagaaaaggcagaaactggatgagattctgcagcagcataaa
atgaaatcggagagagagcgtaaggcacggcgtaaaggcaaagccctacaaagtgaagag
gccagcgccccgtctgctgccgaggaagaggagatggagggttccggggccagcggcaac
gaggaggaagctcccgaggatggagaaggtggggctaacaacagctcagacacagagagc
ctgccctctccgcgttcctctgaggacagcaaggctaaagaggagggtggcgctagggcc
aaggctagctccaaacctgtggacaaggacgcctcagcctcccacatggtccagggagga
gatgaaaagcccccaggagatggggacaagaccatcaagcaggaggtgaagactgaagca
ggggagggtagcaaggagctacccagtgaatccacagacggagacagaaagccccccact
gcagaggcagaggagagcaagagctcctccaagagctccaagagggaccacgagcccaag
actggctcccatgcagacagtgactctagcgccacctgcagcgctgatgaggtggaggag
tcggagaacaccgagaagaacaggatgacatccccaaaccggcccagccttctaaactat
gctcatgatggggtcatctcctcccccctgcagaagcccatggacctgaagcagctcaaa
cagagggctgcggccatcccccctattatgccccagatcccggagggtggcccgcggggt
ggggttggtaaggccgtgctgcccccccatgccctggctctctaccagcagcagatcacc
atggcccacggagagtcctcccaggaggccaagcagcagcagcatgcaggtcagcccagc
aaacagcacccttacccagcgcagggagacagagacccccacaacatcagcagcccccgt
gtccgcccacgcagcccctccaccagcgacaaggacgagctggaaggcaacgagaggtgg
ctgcagactctacttcacggattacataagtcccgggccttctctcctcacggagaccct
aagaagcaggcggtggggccagaggacctgagggccactaccctgggccggcctgtcatg
tccccctacccaatgtcccctcgagacatggccaagctcagccacgatcaacacctgctc
cactataactcatctttccagcaggttggccactctggaccccctggtctgcagcaggat
ggcatcaggttggcagcggtgcgccccctccacatgccagagccaccccctctcatctcc
tccaacaagccaggggggtctatcacacagggaaccccagtgcagctgcatagcccggct
cacgggatggaccatgggaagatgccccctgtacagatgggtttgtcctggatggatcag
aggaaagtgggtgagtccaagtgtctggagtgggtgcagcattcccagccttggtttgct
ggtccctaccctgtggtgaagcaggagcagctgtccccgcggtgctcgtcctcccaggca
gagaacctgtccacgcagggggcgccccacgacgccaacgctggacgtgggtccatgcca
gcggtgcaggggggcagcatcacgaagggcatccctgggaccagagttcaccaggactcc
cccatctcctaccgaggaggctccatcacccagggcaccccggcagacgttctgtacaag
gggaccataacccgtctgatcacggaagacaatcccagcagggcagagagggagcgggac
gaggccctgtccaaaggacatgtggtctatgagggcatcagcggacacatcctcacctat
gaccgcctaccctctcagaaccctaaagaagacggccggggccagcctggggagatcttg
gggctgaagcgcccctatgatgtcatggagggagggatctccagggggctgcccatgagg
gactctctgtctgcagccaactgtgagggtctgatgggtagagccatgccccatgagaga
gacagcccacacccgacccaccacatccgtggttccatttcacagggtatcccccgtcac
ctggaaccccaggatggctacatgaggcgagagcccaagcagatgaagagagagggctcc
ccgccccgagggcctagccagatggctgaccccatgaagggccgagacggcatggtgccc
accgtgaaggaggggggccgatccatccacctcattcccagagaggagctccgacagatg
cccgaaggcatgatgatggccaaggctggcaaagatggcatcatagcacagggtgctcca
atgaagcaggagcagggtggcttaaggaaggggcatgacgttcgttccatcatcgccagc
tccccgcgctcccactacagcatgccccctcacctggagatgcgggggcctgagcagcgg
ggccgctacgaggaaggtcctaagggtcggcccagcgctgtggtcagcacggccagctcc
atggcccgctcctcgcctctggccatggggggcgatcagggtggcaaggcccaccacagc
cccgttggctacgaggaacacaagggtggcatgagggctccctacactgggccttctcac
agaggatccccgctgtccagagaatcaggccagcggcagcatgaaggctccaataagaat
cagcctcaggagcgcaagtccacacccacccctagggagatgagctccggcaagtcaccg
ctgtcgggcgttgccgagcagcaggcccaacaacaggcccaacaacaggcatccctggcg
tcgtacgagcgtctgctgcaaggtctgggggctgacgtgtaccgaggtcagatccccctg
gcctttgaccctgctgccctgcgtcagggcatccccatcgacccagcagcctactacctg
cctcgtcacctggcccctaaccctggctaccctcacccctacccctacctgatccggggc
ttccctgacacggcggccctggagaaccgccagacgctgctcaacgactacatcacctcc
cagcagatgcaccagtggcctgcagccgccgccatggctgcccagcgctcagacctgctg
agggggctctcaccacgggaccagcctctccaactgccctactctgctgccccgcgcggg
atcatcgatctgtctcaggtgccacacttacctgtcctggtccctccctctgcagggtct
tccggctcccccatggaccgcatcacctacatccctggagccttccctagccagccatac
acctcctctcccatctcaccagttgggccccaacacatgagcaagcagcacggcacacca
tcctctgctgaccgcgagcgggagagagaccgggagagagaccgcgagagggagcgggag
agagaccgcgagagggacagggaacaggagagagagagggagagggatcgcgagagacaa
cgggacagagacagagagcgggagagagagcgggacagggacagagaaaaggggatctct
cacggcaacgtggaacacgcccccatctggagaccaggcacagagcacagctcaggtggt
agtgtcaggccctcctcccactctggctatggccaccagcactccccggtgtcccctcgc
acccaggacagtgtccagcagaggcccagtgtcctgcacaacactgggggcaagagtctg
cctgtcagcgaccacaacaacccctctgtgctaaggtccatgccaggctcaaatcgctac
ccaggctacgcctaccaacaaagcatggactctaaggaaatgggccgggatgggggcaag
agtaggggaggccttcccaaacacacccaagaccaacatgggccctctatatcctccagc
aaatctgaccccaagctggccagccctaaccaagggggttaccccagcccctacccccag
ggctcatcagcctctcaccactcagggcgaccccctcacctgctgcccccccagtcggat
aacgctgctggccgcggagaaagtggcacacctagtagggaaaagactcaaaacaaaccg
atgtccgttcaggaacaagagctccgagcactcggtaagaccaccatgactgcggccaac
ttcataaacgcgattatcatgcgtcaaatttcttgtgaaacggggatgccagagacgggc
tcgctcgtggccaacagcgccagtgatgttcaacagaagatgatgcccatggagcagcac
ggtctgtaccggcctccctctgaggagaggctgtccccgggccagcagccccagtccccc
ctggtcaaaggcagccagagggtggtcaccctggcccagcacatcagtgaggtgatcacc
aaggactacacccggcagagccagcaggcccagcagcaggtccctatgcagcagtcttac
catagcaactctgtcctggacctgacccggccccccagcgccccccaggccccacctgcc
tcccaggagcccagccaggggcctcgctacaccccagagggagccggcggggatcgtgcc
cgagacaggtcccctcctcagcccaaggtgtcacctgtcaatatgtctacagacggcatt
gagcctgtgtcccctgccggagccatgtctgaaccagagacacaaggagcttcctacccc
aacgagcagggcatgggctctcgctcccctcccagcacctcccagcccccagccttcttc
agcaagctcactgagagcacctcggccattgtcaagtccaagaaacaggagatgatcaag
aagatgaccgtggtcggcagtgacgccgacttcaatcctggtcagccaggaacagagatt
ttcaacatgcctgcctctaccactgcaggacctgtgagtatacgcagccacccggctccc
gaggtgtctggtaacaccatagggctggaggccattatcagaaaggccctgatgggaaag
tatgatgaacaggccgaggagcgccctccctcctccaatgctattaaccccatggttgcc
agtgtgcctgccgctatgctccccgctgatggacggacggaggactcttactcactgcaa
ggtggggggaaaccaaagggcagcgggcgttctaacgggcggaaggccaaatcccccggg
ccgggcctgtcagggggggagagaccctcctctgtgtcctctgtccactctgagggggat
gccaaccgccgcacgcccgtcaccaaccgtgtctgggaggaccggccctcctccacaggc
gcaacacccttcccgtgtaaccccctgaccatgcgtttcccaagtggcatgccggtgtca
aacccctcccccaccccctctggacagataggggctcagggccagggccggtcctgggag
gaggagcccaagcccctgctgtgttctcagtatgagaccctgtctgacagtgagtga
DBGET
integrated database retrieval system
