Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139390142
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Entry
139390142 CDS
T10872
Name
(RefSeq) protein BTG3-like
KO
K14443
protein Tob/BTG
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
139390142
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocla03019
]
139390142
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
139390142
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
139390142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTG
SR-25
YL1
CASP_C
Motif
Other DBs
NCBI-GeneID:
139390142
NCBI-ProteinID:
XP_070993446
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All DBs
Position
3:18796153..18809498
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AA seq
286 aa
AA seq
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MKREVNAGVNFLRRLAVERGGLDGTKADAFAEKLRQLLVNKFKDHWYPDNPNKGQAFRCI
RVSEGVVYDEEVLRACEESKLKPSELGLPCEIALWIDPLEVCARSGENCRYFTVARFKEG
EEEDEEDVKGDKDVDLDTSDYHSASSSDCGSAVSSDTEEEGKDGETDGRKDEEKTKEKEG
KKEKEKAEGEPYVIAMMPRVRDRFRGEHAQQKVTKTLLQPTSQHYFYHPATVWPTTYKKK
GPVFLTTMYAPPPPPPPVFGYYVLPQPPPQFIMPYATLQPWGAVKN
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgaagagagaagtaaacgccggggtgaatttcctgagacgcctagccgtggagcggggt
ggcttggatggaaccaaagctgacgcttttgctgaaaagctgcggcaacttctggtcaac
aaattcaaagaccactggtaccccgacaaccccaacaaaggacaggcattcaggtgcatc
agggtaagcgagggggtggtgtatgatgaggaggtgttgagagcgtgtgaagagagcaag
ctcaaacccagcgagctgggcctcccatgcgagattgcgctgtggatcgacccactggag
gtgtgtgcacggtcaggggagaactgcaggtacttcacagtagcacgtttcaaagaagga
gaagaggaggatgaggaagatgtgaaaggagacaaagatgttgacctggatacgtctgac
taccactctgccagctcgtctgactgtggctctgctgtctccagcgatacagaggaggag
gggaaggatggagagacggacggaagaaaagatgaggagaagacgaaagagaaagaggga
aagaaagagaaggagaaggcggagggtgaaccttatgtgattgccatgatgcccagggtt
cgggacaggttccggggggagcatgctcaacagaaggtcaccaaaacactgctccagccc
acctctcagcattacttctaccaccctgccactgtgtggcccacaacatacaagaagaag
ggtcctgtgttcctcaccacaatgtacgcgcctccacctccacctcctccagtgttcggc
tactacgtcctgccccagccacccccgcagttcatcatgccttatgccactctgcagcca
tggggggctgtgaagaactaa
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