KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139390158
Entry
139390158         CDS       T10872                                 
Name
(RefSeq) cyclin-H isoform X1
  KO
K06634  cyclin H
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03022  Basal transcription factors
ocla03420  Nucleotide excision repair
ocla04110  Cell cycle
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    139390158
  09124 Replication and repair
   03420 Nucleotide excision repair
    139390158
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    139390158
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ocla03021]
    139390158
   03400 DNA repair and recombination proteins [BR:ocla03400]
    139390158
Transcription machinery [BR:ocla03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     139390158
DNA repair and recombination proteins [BR:ocla03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     139390158
SSDB
Motif
Pfam: Cyclin_C_2 Cyclin_N NADPH_Ox Cyclin_C CycT2-like_C
Other DBs
NCBI-GeneID: 139390158
NCBI-ProteinID: XP_070993472
LinkDB
Position
30:complement(5439897..5447575)
AA seq 323 aa
MFHISSQKKYWTFDNEESLEQLRYEANQKYRNKMLASGKPGVSDAVFLEAHEENVLFRHY
EKRLLDFCNAFKPVMPKSVVGTAIMYFRRFYLNNSLMEYHPRTIMLICAYLSCKVDEFNV
SSTQFVGNLVQESAAGQERALEQILEYELLLIQQLTFHLVVHTPYRPMEGLLIDIKTRYP
LLENPESLRKSVDDFLTRATLTDSGLLFPPSQIAMTAILNSASRAGLSMESYLTECMGLK
EDKETLLKMYDAMRRIKSLMKKYELPKPDEVNAYKVKLERVHADFGTNSNMKRKRGYEDD
DHVAKEPRMTEEEEWTDEDLDDL
NT seq 972 nt   +upstreamnt  +downstreamnt
atgtttcacattagctcacagaaaaagtattggacattcgacaatgaagaaagtctggaa
caactgagatatgaagccaaccagaaatatcgcaacaaaatgcttgccagtgggaagcct
ggggttagtgacgccgtgttcctggaggctcacgaggagaatgtccttttcagacactat
gagaagagactccttgacttctgtaatgctttcaagcctgtgatgcccaagtctgttgtg
ggtacagctatcatgtatttccggagattttacctgaacaactcactgatggaataccac
cccagaacaatcatgctgatctgtgcctacctgtcctgtaaggtggatgagtttaatgtg
tccagcacccagtttgttgggaatcttgtgcaggagagtgcggctgggcaggagagggct
cttgaacagattttggagtatgagctccttctcattcagcagctcaccttccacctggtg
gtgcacaccccctacagacctatggagggcctgctcatagacatcaagacaaggtaccct
cttctggagaacccagagtctctgaggaagagtgttgatgacttcctgacgcgggccacc
ctgacagacagtgggctgctgtttcccccatctcagatagccatgacagccatcctgaac
agtgcgtcgcgggccggcctcagcatggagagctatctgactgaatgtatgggactgaag
gaggacaaagaaactctcttaaagatgtacgacgcgatgagacggataaaaagtctcatg
aaaaagtatgaacttccaaaaccagacgaggtgaacgcttacaaagtgaaactggagagg
gtccatgctgactttggcacaaactccaacatgaaaagaaaacgaggatatgaggatgac
gatcatgtagcgaaagagccccgcatgacagaagaagaggagtggacggatgaagatttg
gatgatttatga

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