Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139390174
Help
Entry
139390174 CDS
T10872
Name
(RefSeq) ankyrin-1-like isoform X1
KO
K10380
ankyrin-1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
139390174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139390174
NCBI-ProteinID:
XP_070993509
LinkDB
All DBs
Position
30:20612634..20796391
Genome browser
AA seq
2061 aa
AA seq
DB search
MAQAAKHLVKNKELKIQLEAERLQKEEEKAKKRNRSRDKKRKADAVSSFLRAARSGNMDK
AIDHIKNGIDINTANQNGLNGLHLASKEGHVKMVLELLHGGIDVETQTKKGNTALHIAAL
AGQEQVVAELVNYGANINAQSQVRPQPVSDETPIPLAEPPAEEPPATTDNHTKGFTPLYM
ASQENHLEVVKFLLENGANQSLPTEDGFTPLAVALQQGHENVVALLINYGTKGKVRLPAL
HIAARNDDTRTAAVLLQNDPNADVLSKTGFTPLHIAAHYENLNVAQLLLNRGANVNFTPK
NGITPLHIASRRGNVIMVRLLLDRGAQIDAKTKDELTPLHCAARNGHVRIIEILLDQGAP
IQAKTKNGLSPIHMSAQGDHMDCVRQLLQYNAEIDDITLDHLTPLHVAAHCGHHRMAKVL
LDKGAKPNSRALNGFTPLHIACKKNHMRVMDHLLKHSASLEAVTESGLTPLHVASFMGHR
KIVTHLVQKGASPSASNVKVETPLHMACRSGHYEVAEFLLTNAAPVDAKAKDDQTPLHCA
CRMGHKELVTLLLEHKANPNSTTTAGHTPLHIAAREGHTQTTRILLDMEAQQTKMTKKGF
TPLHVASKYGKVDVAELLLERGANPNASGKNGLTSLHVAVHHNNLDVVNLLVSKGGSPHS
AARNGYTPLHIASKQNQVEVANSLLQYGASANAESLQGVTPLHLAAQEGRPDMVALLISK
QANVNLGNKSGLTPLHLVAQEGHVGIADILVKQGASVYAATRMGYTPLHVACHYGNVKMV
KFLLQQQSNVNSKTKVGYTALHQAAQQGHTDIVTLLLKHGAPPNEVTTNGTSALSIAKRL
GYISVIDVLKLVTEETVSITTTEKHRMSFPETVDEILDVSEDEGIAQLTMGEELLGTEGA
RYMKMDDLKDHDDDFLSPKKSMDNYSPAIPRIPCVSPEMVHLKEHEMEQVHTPMPLHREY
DDDSLIPSSPATETSDNVSPVASPIHTGFLVSFMVDARGGSMRGSRHNGLRVIIPPRTCA
APTRITCRLVKPQKLPTPPPLVEGEGLASRIISLGPASMQFLGPVIVEIPHFAALGRGDR
ELVVLRSENGSVWKEHRNRYGDDVLETILNGMDEDLESQEELGKKRIRRIISTDFPLYFA
VVSRVQQESDLIGPEGGQLTSKLVPMVQATFPETAVTKRVRLGLQAQPVPDELVAKLLGN
QATFSPVVTVEPRRRKFHRPIGLCIPLPPSWRESPRDSGEGDTTSLRLLCSVIGGTAPAQ
WEDITGTTKLIYSKDCANFTTNVSARFWLADCPRTAEAVSFSNLLYRELSAVPYMAKFVV
FAKMNEVREGRLRCYCMTDDKMDKTLEQHENFSEVARSRDIEVMEGMPLHLECSGNLVPV
RKATQQPRCFSFQAFKDNRLPVSVKVRDSSKDHSGFLSFLRKSTKYEDSQHVLCNLNITM
PPCIKAAGSEDRRRTLTPLALRERYSAMNEPAMASMSAMERTELKMALIAEQLGLSWAEL
ARELQFSVDDINKIRVENPNSLLEQSSALLNLWATREGKRAKMDSLYTALKSIDRMDIVN
MLEGQGPQPAGRQARESSRRRHNETDHVSPSLSNGYGLMQEELLSPPSMQYSLPSPLGNE
PYWQEVSSLECAPMATTEEDTLMEMSDVQVWPSGNSPSLVAVEDSSLECSNADDSEGLLG
LPYGSLGRPGSGASGGGLSGSMELVEDNSEMGAVDSFSTATHATPASFSTATPATPATPA
SFSTATPATPSSFGGTIAAAVNNINGLDKGQVSNVVRSEAAAVGGNMTGGDGAGGGGGGG
TGSEEGLSLVAGQQQRVYARLSESPGLSRVADRNGDRSSGGSGGSGGSGGGGGGSFLSYL
QEQSGPGWQPVTDHTQAWVGSQTAKPRQAMDSMMSSVRAAMDVDPSQSRVSQEALLQPVR
DMGHTEILRGHFRGTQPFEKGLGFPHRVPELRTWDEVRLRGQGDEAKDLPGEQVSEEQFT
DEHGNIVTKKIVRKVVRRGKGSGDEGCQERSVGVDGSLQDELEAEAEQFMNYAVLSSKPD
IVDVKKGAQIVKCASLRRVKQ
NT seq
6186 nt
NT seq
+upstream
nt +downstream
nt
atggcacaagccgccaaacatctcgtgaagaacaaggaattaaaaatccagcttgaggcg
gagcgcctgcagaaggaggaggagaaggccaagaagaggaaccgatcgcgggataaaaag
cgcaaggctgatgctgtcagtagttttctgcgggcggctcgttctggtaacatggacaag
gccattgaccacataaagaatggcatagacatcaacacagccaatcagaacgggctgaac
gggttgcatttggcctctaaagaaggccacgttaaaatggtgctggagttactacatgga
ggcatcgatgtggaaacccagactaagaaaggcaacacagctctgcacattgctgccctg
gctgggcaggagcaagtggtggcagagctggtaaattacggggccaacatcaatgcccag
tcccaggtgagaccccagccagtgtcggatgagaccccgatccccctggcagagcccccc
gcagaggagccaccagccacaacggataaccatacaaagggcttcactccgctctacatg
gcctcacaagagaatcatctagaagttgtgaagttccttttggagaacggggccaatcaa
agccttcccactgaggatggcttcacccctctcgccgtggctcttcagcagggacatgag
aatgtcgtggccctgctcatcaactatggcaccaagggaaaagtccgtctccccgcgctg
cacattgcggcgcggaatgatgacacacgcacagctgccgtgcttctacagaacgaccct
aacgcagacgtcctgagcaagacaggcttcacaccgctccatatcgccgcacactacgag
aacctgaacgtagcccaattgttgctcaacagaggagccaatgtcaatttcacccctaag
aatggcatcacacctttgcacatcgcatccaggcgggggaacgtgatcatggtacgactc
ctgctggaccgaggggcacagattgatgccaagaccaaggatgagttgactccactgcac
tgtgcagccaggaacggacacgtgaggatcattgagatcctactggaccaaggggctccc
atccaggccaagaccaagaacggcctgtctcccatccacatgtcagcacagggggaccac
atggactgtgtgagacaactcctgcaatacaacgctgagattgatgacatcacattggac
cacctgacccccctgcacgtggcagcccactgtgggcaccaccgcatggccaaagtgctg
ctggacaagggagcaaaacccaactcccgtgcactgaatggtttcactccgcttcacatt
gcctgtaagaagaaccacatgcgtgtgatggaccacctgctcaaacactcagcgtcccta
gaggctgtgacagagtctggcctgactcctctacacgtggcctcgttcatgggccaccgc
aaaatagtcacccatctggtacagaagggggcttctcccagtgcttccaatgtaaaagtg
gagactcctctccacatggcatgtagaagtggacactatgaggtggcagagttcttactg
accaatgcagcaccagtagacgccaaggcaaaggatgaccagacaccactccactgtgcg
tgtcggatgggccacaaggagctggtcactctgctgctggaacacaaggccaaccccaac
tccaccaccacagccggacacacacccctccacatcgctgcccgtgagggacacactcag
actacacgcatcctactggacatggaggcccagcagaccaagatgaccaagaaaggcttc
actcctctccatgtggcttctaaatatggcaaagtggacgtggcagagctgctgctggag
agaggggccaaccctaacgcttctggcaagaatggactgacttctctccatgtggctgtc
catcacaacaacctggacgtggttaatctgctggtcagcaagggaggctccccacacagt
gcagctaggaatggctacacccctctccacatagcttccaagcagaaccaggtggaggtt
gccaacagcctgctgcagtacggcgcctcggccaatgctgaatccctccagggggtcacg
ccccttcacctggcagctcaggagggccggcctgacatggtagccctgctcatctccaaa
caggccaacgtcaacctggggaacaagagtggactgactcctctccacctggtggcacag
gaaggccacgtgggcatcgctgacatcctggtgaagcaaggggcatcagtgtatgctgcc
acacggatgggatacacccctctccatgttgcctgccactatggcaatgtaaagatggtg
aagttcctcctgcagcagcagtccaacgtcaacagcaagaccaaggttggttacactgca
ctgcaccaggcagcccaacagggccacacagatatcgtcaccttattgctcaaacatgga
gccccgcccaacgaggtcaccactaacggtacgtcagccctgtccatcgccaagcggttg
gggtacatctccgtaatcgacgttctcaaactggtcacagaggagacggtttccattacc
accacagagaaacatcgtatgagtttcccagaaacagtggatgagatattggacgtatca
gaggatgaaggaattgcacagctaacaatgggggaggagctgttggggacggaaggagcc
aggtacatgaagatggatgacttgaaggaccatgatgacgatttcctgtcacccaagaaa
tctatggacaactactcgcctgccattcccaggatcccttgtgtatccccagagatggtc
cacctaaaggagcatgagatggagcaggtacacactccaatgccattacatagggagtat
gatgacgactccctgatccccagcagtccagctacagagacttctgacaacgtcagtcct
gtggccagccccatacacacagggttcctagtgagtttcatggtggatgctcggggtggc
tcgatgcgaggcagcagacacaacggtctgcgtgtcatcatccctccacggacctgtgcc
gcccccacacgtataacctgccgtctggtcaagccccagaagctccccacccctcccccc
ctggtggagggagagggcctggccagccgtatcatctctctgggcccagccagcatgcag
ttcctagggcctgtgatcgtggagatcccacactttgcagccctgggtcgaggggaccgg
gagctggtggttctgaggagtgagaatggctctgtttggaaggaacaccgcaatcgctac
ggggacgatgtgctggagactatcctcaatgggatggatgaagatctggagagccaagag
gagcttgggaagaagcgtatccgacgaatcatctccactgacttccccctctactttgct
gtggtgtcgcgtgtccagcaggagagtgacctgattggcccagaggggggtcaactgacc
agtaagctggtgccgatggtccaggctacgttccctgagacagcggtcaccaagcgagtc
cgtctgggcctgcaggcccaaccagtcccagacgagctggttgccaagctgctgggtaac
caggcaaccttcagccccgtggtgactgtggagccaaggcgacgcaagttccaccggccc
atcggcctgtgcatccccctgcccccctcctggagagagagcccccgggactctggggag
ggggacaccaccagcctacgcctgctgtgcagtgtcatcggtggcacagccccagcccag
tgggaggacatcactggtaccaccaagctcatatatagcaaagactgtgccaacttcaca
accaatgtgtcagcacggttctggctggctgactgtcctaggacagccgaggctgtgtct
ttctccaacctcctgtatcgagagctctcagctgtgccctacatggccaagtttgtggtg
tttgccaagatgaacgaggttcgtgagggccgcctgcgctgctactgcatgactgatgac
aagatggacaaaaccctggagcaacacgagaacttcagtgaggtggcccgcagtcgtgac
atcgaggtgatggagggaatgccactgcacctggagtgttctgggaacctggttccagtg
aggaaggctacccagcagcctcgctgtttcagcttccaggccttcaaagacaacagactc
cccgtctcagtcaaggtgagagacagtagcaaggatcactctggattcctgtccttccta
cgcaagtctaccaagtatgaagacagccaacatgtgctgtgcaacctcaacattaccatg
cccccgtgtatcaaggctgctggtagtgaagaccggaggcgaactctgaccccattagcc
ctgcgagagagatacagcgccatgaatgagcctgccatggcatcaatgagtgccatggaa
aggacagagttgaagatggctttgatagctgaacagttgggactgagctgggctgagctg
gcgagggagctacagttcagtgtagatgacattaataagatccgtgtggagaatcctaac
tccctattggagcagagttctgccctgctcaacctatgggccacccgtgagggcaagaga
gccaagatggatagtttgtatacagctctgaagagcattgaccggatggacatagtgaac
atgttggagggccaggggccacagcctgcagggaggcaggcccgggagtcaagcagacgc
agacacaacgagactgaccacgtctccccgagcctgagcaatggttacgggctgatgcag
gaggagctgctctcccctccctccatgcagtacagcctgccctccccgctgggcaacgag
ccctactggcaggaagtctccagtctggagtgtgctccaatggccaccactgaggaggac
acgctcatggagatgtccgatgtgcaggtgtggccctctggcaacagcccctccctagtg
gccgtggaggactcctcgctggagtgcagcaatgccgacgactcggaggggctgctgggg
ctgccgtatgggagcctgggccggccgggcagtggggccagcggtggggggctgagtgga
tctatggagctggtggaggacaactcagaaatgggggctgttgactcattcagcaccgcc
acacatgccacccctgcctcgttcagcaccgccacacctgccacccctgccacccctgcc
tcgttcagcaccgccacccctgccacaccttcttcgttcggaggcaccatcgccgccgcg
gtcaacaacattaatgggctggacaaaggtcaagtgtcaaatgtcgtgaggtcggaggca
gcagcggtcggaggcaacatgacgggtggagatggagctggaggaggaggaggaggaggg
acaggctcagaggaagggctttctcttgttgcaggacaacagcagcgggtgtacgcccgg
ctgagcgagtcgcccggtctgagccgcgtggcagatcgtaatggagacaggtccagtggt
ggcagtggtggtagtggaggcagcggtggaggtggtggaggctctttcctgtcctacctg
caggagcagtcgggtccaggctggcaacctgtcacagaccacactcaggcctgggtgggc
tcgcagacagccaaacccaggcaggccatggactctatgatgtcatcagtacgcgccgcc
atggacgtggaccccagccagtcccgcgtgtcccaagaggccttgcttcagccagtgcgt
gacatggggcacacggagatcctgcgtgggcacttcagaggcacccagccatttgagaag
ggcctggggttccctcacagggtgccagagctgcggacctgggacgaagtacgcctgagg
gggcagggtgatgaggccaaggatctcccaggggaacaagtgagcgaggagcagttcaca
gacgagcacggaaacattgtcaccaagaagattgtgaggaaagtggtgcgcagggggaag
ggctcaggtgatgaggggtgtcaggagcgttcagtgggcgtggatggctctctgcaggat
gagctggaggctgaagcggagcagttcatgaactacgccgtcctgagcagcaagccggat
attgtggatgtgaagaagggtgctcagatagtgaaatgtgccagtctgcggagagtaaag
cagtga
DBGET
integrated database retrieval system
