Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139390175
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Entry
139390175 CDS
T10872
Name
(RefSeq) transcription factor COE2-like isoform X1
KO
K09103
early B-cell factor
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139390175
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
139390175
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Gene cluster
GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
Motif
Other DBs
NCBI-GeneID:
139390175
NCBI-ProteinID:
XP_070993516
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Position
30:20520254..20561899
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AA seq
582 aa
AA seq
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MYGIQEHLIRDVSGLKERTLGEEMDPVRSWVRNVGVVDANVAAQSGVALSRAHFEKQPPS
NLRKSNFFHFVLALYDRHGQPVDVERTSFVDFVEHDKEQTGEKTNNGTHYKLQLLYSNGV
RTEQDLYARLIDSVTKQPISYEGQNKNPEMCRVLLTHEVMCSRCCEKKSCGNRNETPSDP
VIIDRFFLKFFLKCNQNCLKTAGNPRDMRRFQVVLSSTVSVDGHVLAVSDNMFVHNNSKH
GRRARRLEPGESVENGMEYATPCIKAISPSEGWTTGGAMVIVIGENFFDGLQVVFGSMLV
WSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFIYTALNEPTIDYGFQRLQ
KVIPRHPGDPDKLAKEMLLKRAADLVEALYGNPHSNQDMLLKRAADIAEALYSVPRPHSQ
LQALPSSPAHGSVMGLGSYPSQLGVSIGEPGQTSQGYIRNSSSLSPRGYPSASTPQQSGY
GGGGGMSGGYGAVPMTSLGVPGSPGFSSASPTGSPYGIMPSSPTIPGSSSSSLLPFSSFP
SSAKQKSAFAPVLRPQGSSSPACPASGGNSFRAMTGLVVPPM
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgtacgggatccaggagcatctcataagagacgtcagcggattaaaagaaagaactctg
ggagaggagatggatccggtccggtcctgggtgcgtaatgtcggtgttgtcgatgctaac
gtagcggcgcaaagtggtgtagctctctccagggcccactttgagaagcagcccccctct
aacctgcgcaagtccaacttcttccacttcgtcctggcactctatgacagacacggacag
cctgtagacgtggagaggacttcctttgtggactttgtggagcacgacaaggagcagacg
ggagaaaaaaccaacaacggcacgcactacaagctgcagctcctctacagcaatggggtt
cgtacagaacaggatctttatgcacgacttattgactccgtcactaaacagcccatatca
tatgagggacagaacaagaatcctgaaatgtgccgggttttgctcactcacgaggttatg
tgcagtcgctgttgtgagaagaaaagctgtggaaaccgcaacgagacgccctctgacccg
gtcatcattgacaggttctttttgaagtttttcttgaagtgtaaccagaattgtctgaag
acagcaggaaacccaagggacatgagaagatttcaggtggtcctgtccagcactgtcagt
gtagacggccatgtcttagccgtgtctgacaacatgtttgtccacaataactccaaacat
ggccggagagctcgcaggctagagcctggagagtcagtggagaacggtatggagtatgcc
accccatgtatcaaagccatcagccccagtgagggctggaccacaggcggggccatggtc
atcgtgatcggggagaacttctttgacgggctgcaggtggtgttcggcagcatgctggtg
tggagcgagttgatcacgccccacgccatccgtgtccagacgcccccacgccacatccca
ggggtcgtggaggtcacgctgtcctacaaatctaaacaattctgcaagggggcacctgga
cgctttatctatacagcgctgaatgagcccaccatagactacggtttccagaggcttcaa
aaggtcattcccagacaccctggtgaccctgacaaactagctaaggagatgctactgaag
agagcagctgatctggtagaagccttgtatggaaacccacacagtaatcaggacatgttg
ctgaagcgtgcagcggacatcgctgaggccctgtacagtgttccccgtccccacagccag
ctgcaggccctgcccagctccccagcccacggcagtgtcatgggcctgggctcatacccc
tcccagctgggggttagcattggcgagccaggacaaaccagccaaggttatattcgtaac
tccagcagtttgtccccccgggggtacccctctgcctccacccctcagcagtcgggctat
gggggtggtggaggcatgagtggggggtacggggcagtgcccatgactagtctgggggtg
ccagggtcccctggtttcagcagtgcctcccccactggttctccctatggcataatgcca
tctagtcccactatcccgggttccagctcctcctccctcctgccgttctcctccttcccg
tcctcagccaaacagaagagcgccttcgctcctgtcctccggccccagggctcctcctct
cctgcctgtcccgcttcaggaggcaacagcttcagagcgatgactggcctggtagttccc
ccgatgtag
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