Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139390180
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Entry
139390180 CDS
T10872
Name
(RefSeq) BDNF/NT-3 growth factors receptor-like isoform X1
KO
K04360
neurotrophic tyrosine kinase receptor type 2 [EC:
2.7.10.1
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04010
MAPK signaling pathway
ocla04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
139390180
04020 Calcium signaling pathway
139390180
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ocla01001
]
139390180
Enzymes [BR:
ocla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
139390180
Protein kinases [BR:
ocla01001
]
Receptor tyrosine kinases (RTK)
TRK family [OT]
139390180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
I-set
Ig_3
LRR_8
LRRCT_2
Ig_2
C2-set_2
LRR_5
LRRNT
Haspin_kinase
ig
BiPBP_C
ICAM_N
Ig_5
LRR_NXF1-5
Sdh_cyt
Motif
Other DBs
NCBI-GeneID:
139390180
NCBI-ProteinID:
XP_070993527
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All DBs
Position
30:8232421..8322697
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AA seq
799 aa
AA seq
DB search
MEGAEMSAFRRGSGVFLFGLCCVLMGLWRLGAACPASCSCSGTRIDCVDQERGIMAFPVL
QSELEMDNITDIYIANQSSFSSINDKDLHYYRNLTNLTVTNSRLTYVSRLAFQNNLKLQY
LNLKDNNLSSLSWRIFRHLNISNLILSGNPLHCSCENIWMKLWLGEEADAQDLQCTAEGG
GRKPLTRLKLPHCMVPMATLSPSKVMVQEGADVVLTCNTSGEPSPELIWKMTPLISYYEI
ETSGQVSELHLYNLSSLDNNCKITCSAGNIVGENESTVLLNILFPPNISKLSDAYQDHHW
CIPFSMSGNPKPELRWLLDGEPVIEGPYIMTMIHDFSEREYHGCLQLDSPTHINNGPYTL
LASNKYGQDRKTVNAHFMHNPFEGGTVTEPLYYDDTPLDPPEDRVAVYVVVGIAAVAFTG
FLLMLVILKFGGNSKFGIKGASSVISNDDDSASPLHHVSNGSNTPSSSEMGPDAVIIGMT
KIPVIENPQYFRSNSMLKSDTFVQHIKRHNIVLKRELGEGAFGKVFLAECYNLSPELDKI
LVAVKTLKEASENARKDFHREAELLTNLQHEHIVTFYGVCVESDPLIMVFEYMKHGDLNK
FLRAHGPDSVMMGDGPTNRPVELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVG
ENLLVKIGDFGMSRDVYSTDYYRVSVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVL
WEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTCPKEVYDLMLGCWQREPHMRHHIKEI
HSLLLNLAKASPVYLDILG
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggagggagccgagatgagcgcctttcggaggggtagtggggtgtttctgttcgggttg
tgttgcgtactaatgggactgtggaggctcggggccgcctgccccgcgtcctgctcctgc
agcgggaccaggatcgactgtgtggaccaggagcggggtatcatggcttttcccgtgttg
cagtcggagctggagatggacaacattaccgacatatatattgcaaaccaaagtagcttc
tcgtccatcaatgacaaagacctgcattattaccggaacctcacgaatctaactgtgact
aacagccggcttacctatgtatctcgactggccttccagaacaacctcaagcttcagtat
ctgaatttgaaagacaacaacctgtcatctctgtcttggaggatatttcgacatttaaac
atatcaaatctgattctttcagggaacccactgcactgttcctgtgagaacatatggatg
aagctgtggctgggagaggaggccgatgctcaggacctccaatgtacagcggaggggggc
gggaggaagcccctgaccaggctcaagctccctcactgcatggttcccatggcgactctg
agcccgtccaaggtgatggtgcaggagggtgctgatgtggtgctgacatgcaacacctcc
ggagagccctctcctgagctcatctggaaaatgaccccactcatctcctactatgagatt
gagacctcaggccaagtgtctgagctccatctctataacctctcctccctggacaacaac
tgtaagatcacctgcagtgctgggaacattgtgggagagaatgagtccacagtcctcctc
aacatcctctttccccctaacatcagtaagttgagtgatgcctaccaggaccaccactgg
tgcatcccattcagtatgtctgggaacccaaagcccgagctccgctggctgttagacggg
gagccggtcattgagggaccctacatcatgaccatgatccatgacttctctgagagggag
taccacggctgcctgcagctggatagccccacacacatcaacaacggaccgtacaccctg
ctggccagcaacaagtacggacaggaccgcaagaccgtcaatgcccacttcatgcacaac
ccctttgagggaggaacagtgacagaacctctttactatgacgacacacctctagatcca
ccggaagacagagttgctgtgtacgtggtcgtagggattgcagcagtagccttcacgggt
ttcctcttgatgctggtcatcctaaaattcggggggaactcaaagtttggaatcaaaggt
gcatcgtctgtgatcagcaacgatgacgactcagcctctcctctccaccacgtgtccaat
ggcagtaacactccgtcctcctctgagatgggcccagacgccgtcatcatcggcatgacc
aagatccccgtcatcgagaaccctcagtacttccgcagcaacagcatgctcaaatcagac
acctttgtccagcacatcaagaggcacaatatagttctgaagagggagttgggagaaggg
gcgtttggcaaggttttcctggccgagtgctataacctgtctcctgagctcgacaagatc
ctggtggctgtcaagaccctgaaagaggccagtgagaatgcgaggaaggacttccatcga
gaggccgagttgctgaccaacctgcagcacgagcatatcgtcaccttctacggtgtgtgt
gtggagagcgaccccctcatcatggtgtttgagtacatgaagcacggggacctcaacaag
ttcctcagggctcacggtcccgactctgtgatgatgggtgacggtccgacaaaccgaccc
gtggagctgacccagtcccagatgctgcacatcgcccagcagatcgctgcaggcatggtc
tacctggcctcccagcactttgtccaccgagacctggccacacgtaactgtctggtggga
gagaacctgctggtgaagatcggtgacttcggcatgtcccgagacgtgtacagcacggac
tactacagggtaagtgtgggcggtcacaccatgctgcccatccgctggatgcctccagag
agcatcatgtacaggaagttcaccacagagagtgacgtgtggagtctgggcgtggtcctc
tgggagatcttcacctacggcaaacagccctggtaccagctctccaacaacgaggtgatt
gagtgcattacacaggggcgtgtcctgcagcggcctcgcacctgtcccaaagaggtgtac
gacctgatgctggggtgctggcagagagagccccacatgagacaccacatcaaggagatc
cacagcctactgctaaacctagccaaagcctctcctgtctacctggacatcctgggctga
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