Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139390417
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Entry
139390417 CDS
T10872
Name
(RefSeq) PDZ and LIM domain protein 7-like
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
139390417
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
139390417
Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
139390417
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Paralog
GFIT
Motif
Pfam:
LIM
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
139390417
NCBI-ProteinID:
XP_070993633
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Position
31:complement(3753513..3874626)
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AA seq
431 aa
AA seq
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MSGGPHNDKEAMNIYCITLNGPAPWGFRLQGGKDFSMPLTVSRLTPGGKATQAGVGVGDW
VVSIGETNAEDMTHVEAQNKIRAAEESLTLTLSKAFHAGGDQKDSLAPASVQPKYSFAPS
TAINKMARPFTPGGGNTVIKPVTYAPKVNTPASAPPASMLQPHNGVKASQSPAKAQTQTA
DRPDASKTPATVKAGPLVRPPWVTDPGFADRYAPDKTSTVLTQHRQPAQPTPMQNRSSIL
QAAQQAPEDSGRTPLCGACNKIIRGRYLVALGQSWHPEEFQCSQCKVMLDEGGFFEEKGS
IFCSKCYDNRCAPNCAKCKKTIVGDIMHALKMTYHVQCFMCAACKSPIRNQAFYMEEGEP
YCERDYEKMFGTKCHGCDFKIDAGDRFLEALGYSWHDTCFVCAFCQINLEGKTFYSKKDK
PLCKGHAFAPV
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcggtccccataatgataaggaggccatgaatatatactgtataaccctcaac
ggcccggcaccatggggcttcagacttcagggggggaaggacttcagcatgcccctgact
gtgtccaggctgacccccgggggtaaggccacccaggccggtgtgggcgtgggagattgg
gtggtgtccatcggagagaccaacgcagaagacatgacccatgtggaggcacagaacaag
atcagagcagcagaggagtctctcaccctcaccctcagcaaagctttccatgcgggtggc
gatcagaaggattcactcgcccccgcctcggttcagcccaaatactccttcgcccccagc
accgctatcaacaagatggcgcgaccattcacgccgggcggcggtaacacggtcattaaa
ccagtgacatacgcccctaaagtaaacaccccggcctcagcgccgcccgccagcatgcta
cagccacacaacggtgtcaaggcctctcagtcacctgctaaggcccagacccagacagca
gacagacctgacgcctctaagactccagctacagtcaaggctggtcctctggtacgtcct
ccgtgggtgaccgacccagggttcgctgaccgttacgccccagacaagaccagtacggtt
ctgacccagcacagacagccggcccagccaacgcccatgcagaaccgctcctctatccta
caggcagctcagcaggcacccgaggacagcggaaggacccctctctgtggagcctgcaac
aagatcattaggggccggtacctggtggctctgggtcagtcctggcacccagaagagttc
cagtgttcccagtgtaaggtgatgttggatgagggaggattctttgaggagaaaggctca
atcttctgctccaagtgttatgataaccgctgtgctcccaactgtgccaaatgcaagaag
acgatcgtaggggatatcatgcatgctctgaagatgacctaccatgtccagtgtttcatg
tgtgctgcctgtaagagccccatcagaaaccaggccttctatatggaggagggagaacct
tactgtgagagagattatgagaagatgtttggtactaagtgtcatggctgtgactttaag
atcgatgctggggaccgcttcctagaggccttgggatacagttggcacgacacctgcttc
gtctgcgctttctgccagatcaacctggaaggaaagaccttctactctaagaaggataag
ccactgtgtaaaggccatgccttcgctcccgtctga
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