Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139390427
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Entry
139390427 CDS
T10872
Name
(RefSeq) neuronal acetylcholine receptor subunit beta-2-like
KO
K04813
nicotinic acetylcholine receptor beta-2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04080
Neuroactive ligand-receptor interaction
ocla04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
139390427
04082 Neuroactive ligand signaling
139390427
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139390427
Ion channels [BR:
ocla04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
139390427
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
DUF2417
DUF4537
Motif
Other DBs
NCBI-GeneID:
139390427
NCBI-ProteinID:
XP_070993648
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Position
31:complement(32117640..32139940)
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AA seq
505 aa
AA seq
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MADPVTAALALLVLTLATALGAEIEERLVTHLLSPERYNKLIRPAVNKSQQVTIHIQVSL
AQLINVNEREQIMTTNCWLTQVWNDYRLVWDPEEYEGIKKVRLPSQHIWLPDIVLYNNAD
GNYEVSFYSNALVSNNGEVYWLPPAIYKSACKIEVRDFPFDQQNCTLKFRSWTYDHTEID
LILLSDFASRDDFKPSGEWDIVSLPGRKNEDPSDITYLDITYDFIIKRKPLFYTINLIIP
CVLITSLAILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLAVPLIGKYLMFA
MVLVTFSIVTSVCVLNVHHRTPSTHTMPRWVKRLFLHRLPSFLFMRRPGSSNIRERFRQK
HQRRSYSDLKLRDGAVAVAAGGMGVAGGSGMGSADSFYVNEESAKRYGWKISDLSENTEF
RKRMTVKCHADVEEAVDGVRYVAEKMKIEDNDEGVIEDWKYVAMVIDRLFLWIFVFVCIT
GTLGLFMQPLFQSYNTPTADDLEQN
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggcagacccggtgacagcagcgctcgctctcctggttctcaccttggcaactgccttg
ggtgcggagatagaggagcgactggtgacccacctgctgtctccagagcgctacaacaaa
ctgatcagacctgctgtcaacaagagccaacaggtcaccatccatatacaggtgtcccta
gcccagctcattaatgtgaatgaaagagaacagatcatgaccaccaactgctggctgact
caggtatggaatgactacaggttggtgtgggacccagaagagtatgagggcattaagaag
gttcgcctcccgtctcaacacatctggctgcctgacatcgtcctctacaacaatgcggat
gggaactacgaggtgtcattctactccaacgcgttggtctccaacaatggagaggtgtac
tggctgccccccgccatctacaagtcggcctgcaagatcgaggtccgcgacttccccttc
gaccagcagaactgcacgctcaaattccggtcctggacctacgaccacacggagatcgac
ctgatcctgctcagcgacttcgccagccgcgacgacttcaagcccagcggcgagtgggac
atcgtgtctctgccgggacgcaagaacgaagacccctctgacatcacctacctggacatc
acctatgacttcatcatcaagcgcaagccactgttctacaccatcaacctcatcatcccc
tgtgtgctgatcacctctctggccatcctggtgttctacctgccgtctgactgtggagag
aagatgactctctgtatctcggtcctcctggccctcactgtgttcctgctgctgatctcc
aagatcgttccgcctacgtccctggctgtccctctcatagggaagtatctgatgtttgcc
atggtgctggtcaccttctccatcgtcaccagtgtgtgtgtgctcaacgtgcaccaccgc
acgccctccacacacaccatgccccgctgggttaaacgcctcttcctgcaccgcctcccc
tccttcctgttcatgcgtcggccgggcagctccaacatccgggagaggttccgccagaag
catcagcggcgttcctactccgacctgaagctgagagacggggcggtggcggtggccgcg
ggggggatgggggtggcaggggggtctgggatgggcagcgctgactccttctatgtgaac
gaggagtcggccaagcgctacggctggaagatcagtgacctgtcagagaatacagagttc
aggaagaggatgacggtgaagtgtcacgcagatgtggaggaggcagtggacggggtgcgc
tacgtcgccgagaagatgaagatcgaggataacgatgagggggtcatcgaggactggaag
tacgttgccatggtgatagaccggctgttcctgtggatatttgtgtttgtgtgcatcacc
gggacgttggggctgttcatgcagcccctctttcagagctacaacacacccactgcagat
gacctggagcagaactga
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