Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139390429
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Entry
139390429 CDS
T10872
Name
(RefSeq) trafficking protein particle complex subunit 11
KO
K20308
trafficking protein particle complex subunit 11
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139390429
Membrane trafficking [BR:
ocla04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
139390429
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Gene cluster
GFIT
Motif
Pfam:
Foie-gras_1
Gryzun-like
Gryzun
TRAPPC13_C
Motif
Other DBs
NCBI-GeneID:
139390429
NCBI-ProteinID:
XP_070993650
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Position
31:complement(18510053..18530716)
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AA seq
1134 aa
AA seq
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MMSPTQWDLPPELCCRPMAFVALTGLDVTYNAIHRAIWDAFCANRRADRVPISFKVLPGD
HEYPKCRTKRTSYEWYIPKGILKTGWMNKHLNLVPALLVLFYELDWDDAVWKEKQSECAT
KVEIVRTSLQGRNTKVAVVLIQKKTPLPPGEDLVASERAASLCNACDLSGKSLFVLPHTD
HLVGYIIRLENAFYEHAQTYYYTEIRRVKSHKEFLNKTTHQLLFVRHQFKIAFFSELKQD
TQNSLKYYRTAYSLVHELRTHETNMLEIKTMAGFINYKICRLCFQHNTPLDAIAQFRKHI
DLCKKKIGSAELAFEHTAWMSKQFQSFGDLFDEAIKLGLTAIQTQNPGFYYQQAAYYAQE
RKQQATHLCAHEASVSYPTPDHLETPSGALDFYGQRAWRQGHQSIDPPHMEKEKGGILAL
QMKEKDVPHSELIIALLSNAVAQFKKYKCPRMKSHLMVQMGEEYNHAKDYTKALKLLDYV
MCDYRTERWWSLLTSILSTALRCSYLMAHVKDYITYSMELVGRASTLREEQKSRIEKNLI
KVLMNEVPEAEPDCDQASAKAAQALWSDRMSLAGSNEFTIEVQDYVPFVQCKAKFLSPSF
HVDDPVQLHVYLRADCPHPVRFSKLCVSLSNQEYNQLCVVEEPCKSQDILEASSQENMCL
VPGKTRIYSFKFVAKTEDVGKKIEITAVDLMLGSDNGRCVFLNWRGGGGDAASSHEALLA
ARSFKSRGRVPEQHVEWDTVSIQASTMIISRIPKISVQLSHEPPALNNEMYRITVSIQSN
EETVTKDVKLTAGLKPGQDANLTQSTHVTLNGLEMCDESHPALLPDIAIGDLQPGEKVEK
CLYVRCVTTGARIFLFHVAYALSTKVEGKDITCRCHKDETVTIETVVPFEVAVKFVSTKF
EHLDRVYVDIPFLLMTDILSASPWPLHLVTSQLQLAPTMAAMDQPQSQVEQVVLQTGECA
SECFSLQCPPVLNGTSSVASGQYLISWKRKSWCADAPVVTTVATLPHVMVETIPLYVHAE
LPSFGRVRESMPVRYHIQNRTGLVQDVEMSVEPSDAFMFSGLKQVRLRILPGAEQEMLYN
FYPLMAGYQNLPQLNISLLRFPAVSGQLLRRFLPSRIFVKPQGRQAEDASIAAA
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtccgacccaatgggatctgcccccggagctgtgctgccggcccatggccttt
gtggccctgactgggctggatgtaacttataacgccatccatagggcaatatgggatgcc
ttctgtgccaacaggagggccgacagggtccccatctcattcaaggtccttccaggagac
catgaatacccaaagtgtaggaccaaaagaacttcctatgagtggtacatccccaaaggg
atcttgaagacaggctggatgaacaagcacctgaacctggtgcctgccttgctggtgctg
ttctatgagctggactgggatgatgcagtttggaaggagaagcagtctgagtgtgccact
aaagtagagatagtcagaacaagccttcaaggaagaaacaccaaggttgcagttgtttta
attcagaagaaaacccctcttcctccaggtgaggacctggtggcttcagagagggctgct
tccctgtgcaatgcctgtgacctgtctgggaagtctctcttcgtcctccctcacactgat
cacctcgtgggctacatcatcaggctggaaaatgcgttctatgagcatgcacagacctac
tattacacagagattaggagggtcaaatcccacaaagagttcctcaacaaaacaacccat
cagttgctgtttgtgagacaccagtttaagattgcattcttcagtgagctcaagcaagac
acacagaattccctaaaatactacaggactgcctacagccttgtacatgagctgagaacc
cacgagaccaacatgctggagataaagaccatggctggattcataaactacaagatctgt
cgactatgcttccaacacaacacacctttggatgccattgctcagttcaggaagcatatt
gatctgtgcaagaagaagattggtagtgcagagctggcatttgagcacacagcatggatg
tccaaacagttccagtcttttggtgacctgtttgatgaggcgatcaagctgggtctgacg
gccatccagactcagaaccctggcttctactaccagcaggctgcctactacgcccaggaa
cgcaagcagcaagcaactcacctgtgtgcccatgaggccagtgtgagctaccccacccca
gaccacctggagacgcccagcggagctctggacttctatgggcagagagcctggagacag
ggccaccagagtatcgatcccccacacatggagaaggagaaaggaggaatcctggcgctg
caaatgaaggagaaggatgttccccactccgagctaatcattgctctgctcagcaacgct
gtggctcagttcaagaaatacaagtgtcctcggatgaagagccacctgatggtgcagatg
ggagaggagtacaaccatgccaaggactacaccaaagcactgaaactgctggactatgtg
atgtgtgactaccgtacagagcgctggtggagcctgctcacctccatcctcagcacagcg
ctacggtgctcctacctgatggcccacgtcaaggactacatcacctactccatggagctg
gtcggacgagcttctactctacgggaggagcagaaatccaggattgagaagaatctcatc
aaggtcctgatgaacgaggtcccagaggcagagccagattgtgaccaggcctcagccaag
gctgcccaggccctgtggagcgaccgcatgtctctggctggcagcaatgagttcaccatc
gaggtgcaggactacgtaccctttgtccagtgcaaggccaaattcctgtcccctagtttc
cacgtggatgacccagtccagctgcatgtctacctgagggctgactgccctcaccctgtc
cgcttctctaaactgtgtgtcagcctcagcaaccaggagtataaccagttgtgtgtggta
gaggaaccgtgtaagtctcaggatatcctagaggcctccagtcaagagaacatgtgcctg
gtccctggcaagacacgcatatacagcttcaagtttgtggctaaaactgaggatgtgggg
aagaagatagagatcacagcggtggacctgatgctgggcagtgataacggccgctgcgtc
ttcctcaactggcgaggcgggggaggagatgctgcctcgtcccacgaagctctgctggcg
gccaggtcctttaagagcagggggcgtgtcccagagcagcatgtggaatgggacaccgtg
tctatccaggccagcaccatgataatctctcgcattcccaagatctctgttcagctgagt
catgagccccctgctctgaacaacgagatgtaccgcatcactgtctccatccagtccaac
gaggagacagtgaccaaagacgtcaaactcactgccggactcaaaccaggtcaggatgca
aacctcacacagtccacccatgtgaccctgaacggtttggagatgtgtgacgaatcccat
cctgcactgcttccagacattgccattggagacctccagccgggagaaaaggttgagaag
tgtctgtatgttcgctgtgtcaccactggagccagaatcttcctgttccatgttgcctat
gccttgagcaccaaggtggagggcaaagacatcacctgcaggtgtcacaaagatgaaacc
gttaccatagaaaccgttgttccatttgaagttgctgtgaagtttgtatccacaaagttt
gagcacctggatagagtgtatgtggacatcccctttctgctgatgacagacatcctgagt
gcgtccccttggcctctccacctcgtgaccagccagctgcagctggcccccaccatggct
gccatggaccagccccagtcccaggtggagcaggtggtgctgcagacaggggaatgtgcc
agcgagtgtttcagccttcagtgtccccctgtgctcaacgggacgagcagcgtggcgtct
ggacagtacctcatctcctggaagaggaaatcttggtgtgcagatgcacctgttgtgacg
actgttgccaccctcccccatgtgatggtggagaccattcctctatatgttcatgcagag
ctgccgtcgtttggaagggtgcgggagtctatgccagtgaggtaccacatccagaaccgg
acggggctggtccaggacgtggagatgtctgtggaacccagtgatgccttcatgttctct
ggcctcaagcaggtgcgtctgaggatcctgcctggagcggagcaggagatgttgtataac
ttctaccctctgatggcagggtaccagaaccttccccagctcaacatcagcctgctgcgc
ttccctgccgtgtccggacagctgcttcgacgctttctcccctcacgcatctttgtcaag
ccccagggccgacaagcagaagatgcctccattgcagcggcttga
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