Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139390472
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Entry
139390472 CDS
T10872
Name
(RefSeq) protein atonal homolog 1b
KO
K09083
atonal protein 1/7
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139390472
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Tal/Twist/Atonal/Hen, Atonal
139390472
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH_STRA8
RAG2_PHD
Motif
Other DBs
NCBI-GeneID:
139390472
NCBI-ProteinID:
XP_070993703
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All DBs
Position
31:108572..109366
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AA seq
252 aa
AA seq
DB search
MTAKTELSGWPDFSAEDFPLLEQSKLGHLGSRTWVKSPGGGQSPYSPRDTGHYAHSGSMD
LSLEKLMSVSKLADSDVRIEMDLDAVQADQGEGGNRKQKRRRVAANARERRRMHGLNKAF
DTLRSVIPSNNNKLSKYDTLQMAQIYIQELSELLIGVVKPEGRGGSRSGCTSPLGMTGIS
SSLQESTSPLPQNRRLIGDQENTGPVGHLIILSAPKSDLGSGNKRVSNTSNGSDGESSHY
SDFEDGQAGRQC
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgacagctaaaaccgaactgtccggctggccagacttctcagctgaggacttccccctg
ttagaacagtcgaaactgggacatctcggatccagaacctgggtaaaatctccaggagga
gggcagtctccatactcaccaagagatacgggccattacgcacacagcggctccatggat
ctctcactggagaaactcatgtcggtgagtaaactagcggacagtgatgtcaggatagag
atggacctggatgcagtacaggcggaccagggagaaggaggtaaccgtaagcagaaacgc
cggcgcgtcgcagctaacgcccgggagaggcgaaggatgcacgggctgaacaaggcgttt
gacacgttgcggagcgtgatcccgtccaacaataataaattgtccaagtatgacactctc
cagatggctcagatctacatccaggagctgtcggagctgctcatcggggtggtgaagcca
gagggccggggagggtcgcggagtggatgcacctctccgctggggatgactgggatcagc
tcaagcctgcaggagtccacctccccgctgcctcagaacaggagactgatcggagatcag
gagaacactggccccgtcggtcacctcatcattctgtctgcgcctaaatctgatctagga
tcggggaataagagggtctctaacacatctaacgggagtgatggagagtcgtcgcattac
agtgattttgaggacgggcaggccggcagacagtgctaa
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