Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139390478
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Entry
139390478 CDS
T10872
Name
(RefSeq) glucocorticoid receptor-like isoform X1
KO
K05771
glucocorticoid receptor
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
139390478
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139390478
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ocla03310
]
139390478
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
139390478
Nuclear receptors [BR:
ocla03310
]
3. Estrogen like
3C. 3-Ketosteroid receptor
139390478
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Motif
Pfam:
Hormone_recep
zf-C4
GCR
Motif
Other DBs
NCBI-GeneID:
139390478
NCBI-ProteinID:
XP_070993710
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Position
31:complement(9283566..9355162)
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AA seq
803 aa
AA seq
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MDQGGVKKSRSNNDNSRVKLLLGETPSERTPLTGAPCSAMSVALATTTTSFLPSSQLMQP
GDVPSGLSNSPPPSGEDLASASVTASVGLYLEDPEPPTTKLLPQQTNTSLGLGLFTLGDT
YSRLEDSIADFHRSSPSMDSLIGGSDPNLFPMSMRTETDFSRDQDLMDMDQEGYIGKDQK
LFNDNTLDLLQDFELTGSPSDFYVGDDAFLSSLADDTLLGDESQDRGVSNSTSKPAATTT
NSGGFSGSNTTTLNGSNLLTCQDESNSSTPMTGNSPTPNTFPVVKLEKESGFIQLCTPGV
IKQEKTSAIRSYSCRMSGSTGGSTSSSPSELSSASPISICGVSTSGGQSYHFGVNSSINT
PLASTTSGASPQKDQKPSVFSLYPPLVTVGEAWNNSSYGDRASGMQGLSSPTSSFSSSFA
SSTSRQGGGAASCTAQGKAGTAHKICLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNY
LCAGRKDCIIDKIRRKNCPACRFRKCLMAGMNLEARKTKKLNRLKGVQQPTMAELTPRPL
PEARSLVPKSMPQLTPTMLSLLKAIEPDTIYSGYDGTLPDTSTRIMTTLNRLGGRQVVSA
VKWAKSLPGFRNLHLDDQMTLLQCSWLFLMSFGLGWRSYQQCDGNMLCFAPDLVINQDRM
KLPYMADQCEQMLKISSEFVRLQVSHDEYLCMKVLLLLSTVPKDGLKSQAVFDEIRMSYI
KELGKAIVKREENSSQNWQRFYQLTKLLDSMHEMVGGLLNFCFYTFVNKSLSVEFPEMLA
EIISNQLPKFKAGSVKPLLFHQK
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggatcagggaggagtgaagaagagcaggagtaacaacgacaacagccgagttaagctc
cttctgggcgaaacgccctcagagagaacccctctcactggtgctccctgcagtgccatg
tccgttgctttggcaaccaccaccacctccttccttccatccagccagctgatgcaacca
ggtgacgtgcccagcggactcagtaacagccctcctccctcaggtgaggacctcgcctca
gcctccgtcacggcctccgtgggcctctacctggaagacccagagcctccaaccacaaag
ctcctgccccaacagactaacacgtccctgggccttggactcttcacccttggggatacc
tactcccgcctggaagacagcatcgctgacttccaccgctcctcacccagcatggactct
ctgatcgggggctcggaccctaacctgttccccatgtccatgaggacggagacagacttc
tcccgggaccaggaccttatggatatggaccaggaagggtacattggaaaagaccagaaa
ctgttcaacgacaacactctggatctcctccaggactttgagttgacaggctccccctca
gacttttacgtaggggacgacgccttcctttcctccctggctgatgacactctgctgggg
gatgagagccaggatcgtggggtctccaactccacctccaagccagctgctactacgacc
aatagtggtggttttagcggttccaacaccaccacgttgaatggtagcaatctactaaca
tgtcaggatgaatccaactccagcacccctatgacaggcaactccccgacccccaacacc
tttcccgtggtgaagctcgagaaggaatctggcttcatccagctgtgtactccaggagtg
atcaaacaggagaagacctcggccattcgtagctactcctgccgaatgagtggtagtacc
ggcggctccacttcctcctccccctcagagctgtccagcgccagccccatctccatctgt
ggggtgagtacctctggaggacagagctaccactttggagtcaacagcagcatcaacacg
cccttggcttccactaccagtggagcttctccgcagaaggaccagaagccctctgtgttc
agcctgtatcctccgttggtgaccgtaggagaggcttggaacaacagtagctatggggac
agagcttctggaatgcaaggtctctccagccctacctcctctttctccagcagctttgca
agttctacttccaggcagggtggtggcgctgcgtcgtgtacagcccagggcaaggccggg
accgcccataagatctgtctggtgtgttcagatgaggcgtccggctgtcactacggggtg
ctcacctgcggaagctgcaaggtgttcttcaagagagccgtggaagggcaacacaactac
ctgtgtgctgggaggaaggactgcatcatcgataagatcagaaggaagaactgtccagcc
tgccgcttccgcaagtgtctcatggcagggatgaacctggaagctcgtaaaaccaagaag
ctgaaccgtttaaagggggtgcagcagcccaccatggccgagctgaccccccgtccgctc
ccagaggccaggtcgctggtccccaagtccatgccccagctcacccccaccatgctgtct
ctactaaaggccatcgagccagacaccatctactctggctacgacggcaccctgccagac
acctccacacgcatcatgaccactctcaacaggctggggggacgacaggtggtatcagcc
gtcaagtgggccaagtctttgccagggttccggaaccttcacctggacgaccagatgact
ctgctgcagtgttcctggttgttcctcatgtccttcggcctgggctggaggtcctaccaa
cagtgtgacgggaacatgctctgcttcgctccagacctcgtcatcaaccaggaccgtatg
aagctgccctacatggcagaccagtgtgaacagatgttgaagatctccagtgagtttgtc
agactgcaggtgtctcatgacgagtatctgtgtatgaaggttctgctgctgctcagcacc
gtgccaaaggatggtctgaaaagtcaggcagtgtttgatgagatcaggatgtcctacatc
aaggagttggggaaggccatcgtcaagagagaggaaaactccagccagaactggcaacgc
ttctaccagctcaccaagcttcttgactccatgcacgagatggttggtgggctgctcaac
ttctgcttctacacgttcgtcaacaagtctctgtcggtggagttcccagagatgttagca
gagatcatcagcaaccagttaccaaaattcaaagccgggagcgtcaagcccctcctcttc
caccagaaatga
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