Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139390568
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Entry
139390568 CDS
T10872
Name
(RefSeq) tubulin beta-4B chain-like
KO
K07375
tubulin beta
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04145
Phagosome
ocla04517
IgSF CAM signaling
ocla04540
Gap junction
ocla04814
Motor proteins
ocla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
139390568
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
139390568
09144 Cellular community - eukaryotes
04540 Gap junction
139390568
09142 Cell motility
04814 Motor proteins
139390568
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
139390568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocla03036
]
139390568
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139390568
04147 Exosome [BR:
ocla04147
]
139390568
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
139390568
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
139390568
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
139390568
Exosomal proteins of colorectal cancer cells
139390568
Exosomal proteins of bladder cancer cells
139390568
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_3
Tubulin_2
Motif
Other DBs
NCBI-GeneID:
139390568
NCBI-ProteinID:
XP_070993874
LinkDB
All DBs
Position
31:complement(27989670..27992658)
Genome browser
AA seq
446 aa
AA seq
DB search
MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEASGGKYV
PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM
AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEGEFEEEEGEEELA
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgagggagattgttcatttacaagctggtcagtgcggtaatcaaattggcgctaagttc
tgggaggtgatcagtgacgagcatggcattgaccccactggaagttaccatggggacagt
gatcttcagttggaaaggattaatgtatactacaatgaagcttcaggtggaaagtatgtg
ccacgtgcagtacttgtggacttggagcctggcaccatggactctgtgagatctggacca
tttggtcagatcttcaggcctgacaactttgtctttggtcagagtggcgctggtaacaac
tgggccaagggccactacaccgagggtgcagagctagttgactccgtcttggatgtagtg
aggaaggaagctgagagctgtgactgcctccagggcttccagctcacccactccctggga
ggtggaactggctctggcatgggcaccctgcttatcagcaagatccgtgaagaatatccc
gaccgcatcatgaacactttcagtgtggtgccctcccctaaagtgtcagacactgtggtg
gagccctacaacgccaccctctcagtccaccagctggtagagaacacagacgagacctac
tgcatcgacaacgaggctctctatgacatctgcttccgtacccttaaactcaccacaccc
acctacggcgacctcaaccacctggtgtctgccaccatgagtggggtcaccacctgtctc
cgcttccctggccagctcaacgccgacctgcgcaaactggcagtcaacatggtgcctttc
ccccgtctccacttcttcatgcctggctttgcacctcttaccagcaggggaagccagcag
tacagagccctgacggttccagagctcactcagcaaatgtttgactctaagaacatgatg
gcagcctgtgatccccgccacggacgctatctcaccgtggccgcagtcttccgcgggcgc
atgtccatgaaagaggtggacgagcagatgctgaacgtacagaacaagaacagcagttac
ttcgttgaatggatcccaaacaacgtcaagactgcagtctgtgacattcctccccgtggc
ctcaagatggccgccaccttcatcggcaacagcactgccatccaggagctgttcaagcgc
atctctgagcagttcacagctatgttccgccgtaaagctttcctccattggtacactgga
gagggcatggatgagatggagttcaccgaggcagagagcaacatgaatgatctggtgtct
gagtaccagcagtaccaagatgctactgcagaggaggagggagagtttgaagaggaggag
ggcgaagaggagttggcttaa
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