Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139390575
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Entry
139390575 CDS
T10872
Name
(RefSeq) cohesin subunit SA-2-like
KO
K06671
cohesin complex subunit SA-1/2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
139390575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocla03036
]
139390575
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
139390575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
AdoHcyase_NAD
Motif
Other DBs
NCBI-GeneID:
139390575
NCBI-ProteinID:
XP_070993882
LinkDB
All DBs
Position
31:complement(12001595..12087614)
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AA seq
1279 aa
AA seq
DB search
MIAAPELPSEFHYPQDTDTRFSSDTDFSEAPDVSINPTKGKGGKKGKKVTGEKGKGAGRM
NGHYQENGMENLMLFEVVKMGKSAMQSVVDDWIEAYKTDRDMALLDLINFFIQCSGCKGV
VSGEMFRNMQNSEIIRRMTEEFDEDSGDYPLTMAGPLWKKFKGSFCEFIAVLVRQCQYSI
IYDEYLMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSINMDNTQRQYET
ERNKMVAKRANDRLELLLQKRKELQENQDEIENMMNAIFKGVFVHRYRDAIAEIRAITIE
EIGMWMKLYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNRELNTRLELFTSR
FKDRIVSMTLDKEYDVAVQAIKLLTLVLHSTDEVLSPEDCESVYHLVYSAHRPVAIAAGE
FLFKKLFSTREPEEEGAPKRRGRQSPNANLIKTTVFFFLESELHEHAAYLVDSLWESGAD
LLKDWECMTSLLLDDPVPGEEALTDRQETALIEIMLCTVRQAAECHPPVGRGTGKRVMTA
KEKKTQLDDRTRMTELFAVALPPLLAKYSIDSEKVTNLLQLPQFFDLDIYTTGRLEKHLE
ALLRQIREIVEKHTDTEVLEACSKTYHALCNEEFTIFNRVDIARSQLLDELVDKFNRLLE
DFLQEGEEPDDDDAYQVLSTLKRITAFHNAHDLSQWDLFSSNFKLLNTGIENGDMPEQIV
VHALQCTHYVVLWYLAKVSEGSHRKEDMVSLRKQMRMFCLMCQRYLTNVNTTVKEQAFTI
LCDVLLVFSHQMVSGGREQLEPLVYSPDDSLQTELLSFILHHVFIDQDDDNGSTDGQQDD
EAAKIEALHKRRNLLAAYCKLIIYNVVEMNTGADIFKQYMRYYNDYGDIIKETMSKTRQI
DKIQCAKTLILSLQQLFHEMMSELGTGFDRSSSAFCGIKELARRFSLTFGLDQVKTRDAI
AMLHKDGIEFAFKEPSPQGEGNPPLHLAFLDILSEFSSKLMRQDKRTVHMYLERFMTFQM
ALQRDDCWLPLISYRNSLQAGGDDDTMSVVSGYSSRGSSVRSKKTKAATPTATVAAAKRR
LPEVEESSSSSADMSWQHQSMQTPVMMPSPHLTSTMMRGPGDMRGEAKRGRDDSYIGVYA
LPSDSQQQPHPHTLPQTPQLHQTPIDYNTQVTWMLAQRQQEEVRQQQERAMNYAKLRTNL
QQAIRRGTGLMEEDEEPIVEDVMMSSEGRMEDLNEGMDFDTMDIDLPPSKNRRERSELKP
DYFDPGSIMDESVLGVSMF
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atgatagcggcaccagagttaccgtcggagttccactatcctcaggatacggacacccgt
ttctcctcagacacagacttctctgaggctcctgatgtcagtatcaacccaactaaagga
aaggggggtaagaaggggaagaaggtgacaggagagaagggtaaaggagcagggaggatg
aacggccactaccaggagaatggcatggagaacctaatgctgtttgaggttgtcaagatg
ggcaagagcgccatgcagtctgtggtggatgactggattgaggcatataaaaccgacagg
gacatggctctgctagacctgatcaacttcttcatccagtgttctggctgtaaaggagtg
gtcagtggagagatgttccgaaacatgcagaactctgagatcatcaggaggatgacagag
gagtttgacgaggacagtggagactaccctctgaccatggcaggtccgctgtggaagaag
tttaagggtagtttctgtgagttcattgctgtcttggtgagacagtgtcagtacagcatc
atctatgatgagtacctcatggacacggtcatatcgctcctcaccggactgtcggactca
caggtgcgagccttcaggcacaccagcacactggcagctatgaaactgatgacagccctg
gtgaatgtagctctgaacctgagcatcaacatggacaacacacagcggcagtacgagaca
gagagaaacaagatggtcgctaagagagccaacgaccggctggagctactgctgcagaaa
cgcaaagagcttcaagaaaatcaggatgaaattgagaacatgatgaatgctatattcaag
ggtgtgtttgtacacagatatcgtgatgccatagccgagatcagagctatcactatagag
gagataggaatgtggatgaagctctacagtgacgccttcctcaacgacagctacctgaaa
tacgtaggctggaccatgcatgacaagcaaggcgaggtgcgtctgaaatgtttgacagcg
ctgcagggtctctactacaacagagaactgaacaccagactggagctgttcaccagccgc
ttcaaggaccgcatcgtctccatgactctagacaaggagtacgatgtcgcagtacaagca
attaaactgctcactctggtactacatagtacagatgaggtactgagcccggaggactgt
gagagcgtctatcacctggtctactccgcccaccgaccggtcgccatagcagccggggag
ttcctcttcaagaaactgttcagtacgcgggagccggaagaggagggcgcccccaagagg
agaggaagacaaagccccaacgccaacctcatcaaaactactgttttcttcttcctggag
agcgagctccatgagcacgctgcgtacctggtggactctctgtgggagagtggagcagac
ctgttgaaggactgggagtgtatgaccagcctgctactggatgaccccgtgccaggggag
gaagccctgacagacagacaggagacggctctcatagagataatgctgtgtacggtgcgc
caggctgcagagtgccacccacccgtaggccgcggaactgggaagagggtgatgacagcg
aaggagaagaagacccagctagatgacaggaccaggatgacagagctgtttgctgtggca
ttgcctcctctgctggccaaatactccatagattcagaaaaggtgaccaacctgctgcag
ctccctcagttctttgacctggatatctacaccacaggacgactagagaagcacttggag
gcgttgctgcgtcagatcagggagatcgtggagaaacacacagacacagaggttctggag
gcgtgctcgaagacctaccacgctctctgcaacgaggagttcaccatctttaacagagtg
gacatcgccaggtcacagctgctcgatgaactggtggacaaattcaacagactgctggaa
gacttcttacaagagggtgaagagcctgatgatgatgatgcctaccaggtcctgtctact
ctcaagagaatcactgccttccacaatgcccatgacctgtcccagtgggatctgttcagc
agtaacttcaagttgctcaacacgggcattgagaacggagacatgccagaacagatagtg
gtccatgctctacagtgtacccactacgttgtcctgtggtacttggccaaggtctcagag
ggcagccacagaaaggaggacatggtgagcctgaggaaacagatgcggatgttctgtctg
atgtgtcaacgttacctcaccaacgtcaacacaaccgtcaaggaacaggcattcaccatc
ctgtgtgatgtgttgctagtctttagtcatcagatggtatcgggaggcagagagcagctg
gaaccgctggtctacagtcctgatgactcgttacagacagaactgctgtccttcatactg
caccatgtgtttatagaccaggacgatgacaacggcagcacagatggccagcaggatgac
gaggcagcgaagatagaagctcttcacaagagacgtaacctcctggcagcctactgtaaa
cttatcatatataacgtagttgagatgaacactggagctgacatctttaaacagtacatg
aggtattataatgactatggtgacatcatcaaggagaccatgtctaagaccagacagata
gacaagatccaatgtgccaagacactcatcctcagtctacaacagttgttccatgagatg
atgtcagagttggggacaggatttgaccgctcgtcctcagcgttctgtgggatcaaggag
ctggccagacgtttctctctcacctttggtctggaccaggtgaaaacacgagatgctatc
gccatgctgcacaaggatggtatagagtttgcgtttaaggagcccagtccccagggagaa
ggaaaccctcctcttcacctggccttcctagacatcctctctgagttttcctccaaacta
atgaggcaggacaagaggactgttcacatgtatctggagaggttcatgaccttccagatg
gccctccagagagacgactgctggctaccgctcatctcctacaggaactccctgcaggcc
ggcggggacgatgacaccatgtctgttgtctccggctactcctccagagggtcgtcggtc
agatccaagaagaccaaggctgctactcccactgctactgtcgctgcagccaagaggaga
cttcctgaagtggaggagagcagtagcagcagtgcagatatgtcgtggcagcaccagagc
atgcagactccagtgatgatgccctccccccacctcacctctaccatgatgagaggacca
ggggacatgaggggggaggccaaacgggggagggacgacagctatataggagtgtacgcc
ctcccttcagactcccagcagcagccacaccctcacacactcccccaaacacctcaactc
caccagacacccatcgactacaatacccaggtgacgtggatgctggctcagaggcagcag
gaggaggttcgtcagcagcaggagagggccatgaactacgccaagctcaggaccaacctg
caacaggccattcgtcgtggtacagggctgatggaggaggatgaggagcctatcgtagag
gacgtgatgatgtcatcagagggtcgtatggaagacctcaacgagggcatggactttgac
accatggacatcgacctgcccccctctaagaacaggagagagagatcagagctgaaacca
gactactttgaccctggttccatcatggatgagtctgtccttggagtgtccatgttttaa
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