Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139390606
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Entry
139390606 CDS
T10872
Name
(RefSeq) prominin-1-A-like isoform X1
KO
K06532
prominin 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocla04147
]
139390606
04090 CD molecules [BR:
ocla04090
]
139390606
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
139390606
CD molecules [BR:
ocla04090
]
Proteins
139390606
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Prominin
FliB_C
Motif
Other DBs
NCBI-GeneID:
139390606
NCBI-ProteinID:
XP_070993938
LinkDB
All DBs
Position
31:39132688..39252063
Genome browser
AA seq
871 aa
AA seq
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MWKTGILLLFWGLLTSGELQQEETEPERRSLPPSGKLDFGYVPQGVYQTLAYYEPGVIGL
LFHMVHAFLYVVQPNPFPEDLVIKVAKDKFGAIQSEYQKPENIVLTLQAIYYETGFVVCA
VLGLLFMVLLPLVGLFFCLCRCCDNCGGEMHQRQRKNADCQRGLLTTLLFATSLVITAGV
LCAYAANQNLSSQLKGMRRLVSSNLRDLQSFTNETPTQVDYLIAQYATAKNKVISDLDNV
GPLLGGKIHEELGKEVCPAMDGALRMAGVKVERAIKAMRETKDALENVSMSLEVLQEATG
KLHFNLSLVRFSLNRTLNDPGCNDEDSDATTAQLCLSIRSSLAQLHVSANFTRLPDMNNQ
LESVNQLMKTDLSNIIQKGYSSFNDTPGMVSDQMRNVFEGARGMLDIIGTNISSFSKVFP
VHSTMANFTNFISHTHSKIEDSYPEIDQIDFYRWICCIGLCCMVVLILAFNFLAILCGTI
GYDKHASPTTRGCVSNTGGTLLMAGVGFSFLFSWILMGVVTATFLVGGNLEKLVCEPFHT
KQLFKVLDTPHLVNPEWRNFIPGYMYNDSDLDLTVESLYSNCKENRGIYSAMRLDKVFNV
TPFLNSSLYTKEVGKMFNDVKIDLRVIVLLESEGKQNLIGFSETGVNRINYAAYLEEVNK
GVTQVDLLSYANELEAQTDLMPKGPLQTSLKGHANSLRQIHSQQVVPMEQAMSMLNQSIR
LLERTASDLPNKVADVLATIEAAQYLISQNATQVVNQETEKYKQNIVGYFRQYIEWVRTS
LTMEVAACKPFSNIVDTVEIVACSFLVDSLNTFWFGLGCCALFLLPSIILSVKLAKFYRR
MDTEDVYDDILAYDTMTRFPRASAPPRHIDW
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaaaccggtattcttctcctcttttggggactattaacgtctggtgaactccag
caagaagaaacggagccagagcgccgaagtctgccaccgtcgggaaagttggattttggc
tatgtgcctcagggagtttaccaaaccctcgcctattacgaacctggagtaatagggtta
ctgttccacatggtgcacgctttcctatatgttgtgcagcccaacccgttcccggaagat
ctcgtcatcaaagtcgccaaggataaatttggagccattcagtcggagtatcagaagcca
gagaacattgttctgacgctccaggccatctactatgagacaggtttcgtggtgtgtgct
gtgctcggcctgctcttcatggtcctgttgcccctggtcggcctcttcttctgcctgtgc
cgctgctgcgacaactgtggtggcgagatgcaccagcgccagcggaagaacgcagactgc
caacggggcctgctcaccacactgctcttcgccacctcactcgtcatcacggctggagta
ctgtgtgcgtatgcagctaaccagaacctgagctcacagctcaaaggcatgaggagattg
gtcagtagcaacctgagggacctgcagagttttaccaacgagacgccaacgcaagttgat
tatctaatagcacaatacgccactgccaagaacaaagtaatttctgacttggataatgtg
ggtcctctgcttggagggaagattcatgaggaattggggaaagaggtctgtcctgcaatg
gacggagcgctccgtatggctggtgtcaaagtggagagggccattaaagccatgcgggag
accaaagacgccctggagaacgtgagtatgtctctggaggttctccaggaggcgacaggg
aagctccacttcaacctgagcctggtgcgcttcagcctcaatagaaccctcaacgacccg
ggctgcaacgatgaggactcggacgccaccaccgcccagctctgcctctccatccgtagc
tccctggcacagctccacgtcagcgccaacttcacccggttacctgatatgaacaatcag
ctggaaagtgtgaatcagttgatgaaaacggacctcagcaatatcattcaaaagggctac
tcctcattcaatgacactccaggcatggtgagtgaccagatgaggaacgtattcgaggga
gcccggggcatgttggacatcatcggcaccaacatcagcagcttctccaaggtgttccct
gtacacagcactatggccaacttcaccaacttcattagtcacacacactccaagatagaa
gactcctaccccgagatcgaccagatcgacttctacaggtggatttgctgtattggcctg
tgctgcatggtggttctcatccttgctttcaacttcctggccatactgtgtggcaccata
ggctatgacaagcacgcctcccccaccacacggggctgtgtctccaacaccggcggcacc
ctgcttatggccggtgtgggcttcagcttcctcttctcctggatactgatgggagtggtg
accgccacctttctggtcgggggcaacttggagaagctggtctgcgagcccttccacacc
aagcagctcttcaaggttttggacactcctcacctggtgaaccctgagtggaggaacttc
atcccagggtacatgtacaacgactcagacctggatctcacagtggagagtctctacagt
aattgcaaggagaacagaggtatttactctgccatgcgcctggacaaagtcttcaatgtc
acacccttcctaaactctagcctgtacaccaaggaggtggggaagatgtttaacgatgtg
aagattgacctgagagttatcgttctgctggagtctgaggggaagcagaacctcattggc
ttctctgagacgggcgtcaacaggatcaactacgcagcctatctagaggaggttaacaaa
ggggtgactcaggtggacttgctgtcgtacgccaatgagctcgaggcacagacagacctt
atgcccaaggggcccctccagacctctctaaagggccacgccaacagtctccggcagatc
cacagtcagcaggtcgtccctatggagcaggccatgagtatgctgaaccagagcatcaga
ctactggagaggacggcctcagacctgccgaacaaagtcgctgatgtactggcgaccata
gaagcagcgcagtatctcatatcccagaatgccacacaagtcgtcaatcaggaaacggaa
aagtacaagcaaaacattgttggttatttcaggcaatacatagagtgggtcaggacttct
ctgaccatggaggtagcggcttgcaaacccttcagcaacatcgtggacacagtggagatc
gtagcctgcagcttcttggttgactcattgaacacattctggtttggcctaggctgctgt
gccctattcctccttcctagcatcatcctgtcagtaaaactggcaaagttctaccgtaga
atggacacagaggatgtttatgatgacatccttgcctatgacactatgactaggttccca
cgggcctccgctccccccaggcatattgactggtga
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