Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139390609
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Entry
139390609 CDS
T10872
Name
(RefSeq) histone deacetylase 3-like isoform X1
KO
K11404
histone deacetylase 3 [EC:
3.5.1.98
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocla03036
]
139390609
Enzymes [BR:
ocla01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
139390609
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
139390609
HDAC complexes
SMART complex
139390609
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
139390609
NCBI-ProteinID:
XP_070993947
LinkDB
All DBs
Position
31:complement(21374162..21383682)
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AA seq
428 aa
AA seq
DB search
MSNRTAYFYDPDVGNFHYGAGHPMKPHRLSLTHSLVLHYGLYKKMQVFKPYKASQHDMCR
FHSEDYIDFLQKVSPNNMQGFTKSLNTFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNH
KICDIAINWAGGLHHAKKFEASGFCYVNDIVISILELLKYHPRVLYIDIDIHHGDGVQEA
FYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYRQLFQPVI
KQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEFVKSFRIPLLVLGGGGYTV
RNVARCWTYETSLLVDEPISDELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLEQIRS
TVFENLKMLNHSPSVQIHDVPSDILSYERTDEGDPDERGSEDNYSRPEAANEFYDGDHDN
DKESDVEI
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacagaacagcatatttttatgatccggatgtggggaactttcattatggtgct
ggtcaccctatgaaaccccatcgtctctcgctgacgcacagccttgttttgcactatggc
ctctacaaaaagatgcaggtttttaaaccatacaaagcctcacaacatgacatgtgccga
ttccactcagaagattacattgactttctgcagaaggtcagccccaacaatatgcagggt
ttcacaaagagtctcaacacctttaatgttggggacgactgccctgtattcccaggcctg
tttgagttctgctccaggtatacaggagcatctctacagggagcgacacagctaaaccac
aagatatgtgacatcgccatcaactgggctgggggtcttcatcatgctaagaaatttgag
gcctctggattttgctatgtgaatgacattgtcatcagtatactggagcttctgaagtac
cacccgcgtgtgttgtacatagacattgacattcaccatggtgatggggtgcaggaagcc
ttctacctgactgatcgggtcatgactgtatccttccacaagtacgggaactacttcttt
ccagggacaggtgacatgtatgaggtaggggctgagagtggccggtactattgcctgaac
gtgcctctccgggatgggatcgatgaccagagctacaggcaactctttcagccagtcatc
aagcaagtggtggacttctaccagccaacctgtatcgttcttcagtgtggggctgactct
ctgggctgtgacagattagggtgcttcaacctcagtatacgaggccatggggagtgtgtg
gagtttgtgaagagcttcaggattcccctgctggtactgggaggaggagggtacacagta
cgcaacgtggccagatgctggacctatgagacctcgctcctggttgatgagccaattagt
gatgagctgccctatagcgagtactttgagtattttgccccagacttcacactccaccca
gatgtcagcaccaggatagagaaccagaactcccgacagtacctggagcagatccgttcg
acggtctttgagaacttgaagatgttgaaccattcccccagtgtccagatccacgatgtg
ccctcggacatcctgagctacgagcgcactgacgagggagacccagatgagaggggctca
gaggacaactattccaggccagaggcagccaatgagttctacgatggtgaccatgacaac
gacaaggagagcgatgtggagatctga
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